Gene Mboo_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2060 
Symbol 
ID5409769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2137390 
End bp2138100 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content62% 
IMG OID640869305 
Producthypothetical protein 
Protein accessionYP_001405217 
Protein GI154151599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.456181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGTT TTCCTCGATT CTTTAGAGGA ATTATTCTGG CAGACCAGGA GCGGCATGTC 
ACAATCTCCG AGCTGGTGCG GGTGCACGCC TGCCCGGTCC GGTTTTACTA CGAGAAAGAC
GAGCCGGTCA CCGAGTCGGA CCGGCATGCG ATCTGCAAGC AGCTCTCGTA CCATCTTGGG
AATCCTCTGG AAGCGAATGT CATCTGGGAC GAGGTGCTCA TTGTCCGCCC AAAGACAGAC
CCGGTGCTCC GCGAGTTCCT GGATATCTGC ATTGCTTCCT GTAAAAAACA CGAGTGGAAA
CCGGCCGTCC AGACCGATGT GACCGTGGTC TCGAAAAAGC ACGGGATCGC CGGTATGATC
GACCGGGTGG CAGCGGACGG GACGTTCTCG ATCGTGCGGG CGGCAGGGGC AATGCCCTTT
GGCACCTATG CGGCCGACCG GCTCCGGATT GCGGGGATCG CCTTCTGCCT GGAAGAGATG
ACCGGGAAAG AGGTGGACGG GGGATTTGTG GAATATATCC CGGACGGTCT CTCCCGCTAC
CATGCGGTCC AGCCCCGGGA CCGGCGCCAG CTCCTTGCCA CGCTCCACAA ACTCCGGGCC
ATCCACCGGG GCGAGGCCCC CGCCCACCCG CTGAATGCTC CCTGCAACCG GTGCAAGTAC
AAGGAGCGGT GCGAGTCAAG CGGGGGGCAC CGGCTGAGTG AGCTCTTGTA A
 
Protein sequence
MAGFPRFFRG IILADQERHV TISELVRVHA CPVRFYYEKD EPVTESDRHA ICKQLSYHLG 
NPLEANVIWD EVLIVRPKTD PVLREFLDIC IASCKKHEWK PAVQTDVTVV SKKHGIAGMI
DRVAADGTFS IVRAAGAMPF GTYAADRLRI AGIAFCLEEM TGKEVDGGFV EYIPDGLSRY
HAVQPRDRRQ LLATLHKLRA IHRGEAPAHP LNAPCNRCKY KERCESSGGH RLSELL