Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2038 |
Symbol | |
ID | 5411165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2113412 |
End bp | 2113966 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640869280 |
Product | membrane protein-like protein |
Protein accession | YP_001405195 |
Protein GI | 154151577 |
COG category | [S] Function unknown |
COG ID | [COG4129] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0752149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0532499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCA GCAAAAGCAG TGCAGGAAAC CCCGGCAGGG TGGCCGGATA TCTGCGGGAA TGTGCGGCCG CGCTCCTGAC TGCAGTCCAG TTTGCCCTGG TTGCGGCCAT CTCGTTCTCG ATTGCCCTCA TCATTTCCAC GCACTTCCCC GGGTCTTCGG ATTCGGTGAT GATCGGGGCC CTGTGGGCGC TGATCTCTGC CATCGTAGTT CTGCAGGACA CCAGGTCATC CACGATAAAA ACGGCGTGGC TGCGGATATT CGGGTCCTTT ATCGGCGCCG TATTCTCTGC CGTGTACCTC ACGTTTTTCC CGTTTTCCCT TGCAGGCATG GGCATTCTCA TCGGGATCGT GGTCTTTGTC TGTGTTCTCC TTAGGATCCC CGACCACCTC CGGCTTGCGG CCTTAACGGT CGGTATCGTG ATGGTGATCT CGGCGCTCAA TCCCGCAATC CCCCCGGTGA TCAACGCGGC TGACCGGTTT GTTGAGGTGA TCATCGGGAG CTCGGTGGCG GTTTGTGCGG CGTGGATATT CCAGTACGTG CTTCACCGGG AATGA
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Protein sequence | MSGSKSSAGN PGRVAGYLRE CAAALLTAVQ FALVAAISFS IALIISTHFP GSSDSVMIGA LWALISAIVV LQDTRSSTIK TAWLRIFGSF IGAVFSAVYL TFFPFSLAGM GILIGIVVFV CVLLRIPDHL RLAALTVGIV MVISALNPAI PPVINAADRF VEVIIGSSVA VCAAWIFQYV LHRE
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