Gene Mboo_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2038 
Symbol 
ID5411165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2113412 
End bp2113966 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content59% 
IMG OID640869280 
Productmembrane protein-like protein 
Protein accessionYP_001405195 
Protein GI154151577 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0752149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0532499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA GCAAAAGCAG TGCAGGAAAC CCCGGCAGGG TGGCCGGATA TCTGCGGGAA 
TGTGCGGCCG CGCTCCTGAC TGCAGTCCAG TTTGCCCTGG TTGCGGCCAT CTCGTTCTCG
ATTGCCCTCA TCATTTCCAC GCACTTCCCC GGGTCTTCGG ATTCGGTGAT GATCGGGGCC
CTGTGGGCGC TGATCTCTGC CATCGTAGTT CTGCAGGACA CCAGGTCATC CACGATAAAA
ACGGCGTGGC TGCGGATATT CGGGTCCTTT ATCGGCGCCG TATTCTCTGC CGTGTACCTC
ACGTTTTTCC CGTTTTCCCT TGCAGGCATG GGCATTCTCA TCGGGATCGT GGTCTTTGTC
TGTGTTCTCC TTAGGATCCC CGACCACCTC CGGCTTGCGG CCTTAACGGT CGGTATCGTG
ATGGTGATCT CGGCGCTCAA TCCCGCAATC CCCCCGGTGA TCAACGCGGC TGACCGGTTT
GTTGAGGTGA TCATCGGGAG CTCGGTGGCG GTTTGTGCGG CGTGGATATT CCAGTACGTG
CTTCACCGGG AATGA
 
Protein sequence
MSGSKSSAGN PGRVAGYLRE CAAALLTAVQ FALVAAISFS IALIISTHFP GSSDSVMIGA 
LWALISAIVV LQDTRSSTIK TAWLRIFGSF IGAVFSAVYL TFFPFSLAGM GILIGIVVFV
CVLLRIPDHL RLAALTVGIV MVISALNPAI PPVINAADRF VEVIIGSSVA VCAAWIFQYV
LHRE