Gene Mboo_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2036 
Symbol 
ID5411163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2111696 
End bp2112037 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content58% 
IMG OID640869278 
Producthypothetical protein 
Protein accessionYP_001405193 
Protein GI154151575 
COG category[R] General function prediction only 
COG ID[COG3136] Uncharacterized membrane protein required for alginate biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.273141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0525282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACC TCTACCTTGC CCTGAAGTTC ATCATCGGAG GAAGCGTTAT TGTAGGGGTG 
ACTGTCCTTG CCGAGCATCT TGACCCAAAA TACGGTGGGC TTTTGGCCGC CGCCCCTATC
ATCACAACGC TTGCCATCCT CTTTACCTCC ACCGGGGCCG GGCAGGAGGT TGGCCGGCAG
CTTGCAATCG GGGCATTCTG GTTTGCGATC CCCACCCTGC TCTTCCTGCT TGCTCTCTAC
TTCCTTATGG GCCGCTATCC GCTGGCCCCC AGTTTCGGCG GGGCATTTTC GGTCTGGCTT
GTGGCAGCAG TTGTCATGAA CCGGGCGCTC ACGCTGGCAT AA
 
Protein sequence
MDYLYLALKF IIGGSVIVGV TVLAEHLDPK YGGLLAAAPI ITTLAILFTS TGAGQEVGRQ 
LAIGAFWFAI PTLLFLLALY FLMGRYPLAP SFGGAFSVWL VAAVVMNRAL TLA