| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2028 |
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| Symbol | |
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| ID | 5411833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2100178 |
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| End bp | 2104035 |
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| Gene Length | 3858 bp |
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| Protein Length | 1285 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640869270 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001405185 |
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| Protein GI | 154151567 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.628704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0470638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTAA TGATTAATAG AAAATCTAAG GGACTATTAA AGGTTTTTAT TAGTTCTACA
TTCCGAGACC TTCAAGCCGA ACGACAACAA TTATATGAAA AATTGAGTGA ATCTATTAGC
CCAGTGGGAA TGGAATTTTT CATTCCTGAT GGGAAGACAT CTCATGAAAT CTCATTGCTG
GATGAGGATC AAGGATTAAA GAACTCAGAT ATAGTAATTT TTTTAATTTC CCCATATTAT
GGATCGCTGA TTGAAAAATG TAATATTCCC ACTTGTAAAG CGGATTGTCC CTTAAAAAAT
GGAACGAAAC AAAAAATTTC ATACACACAT TGCGAATTTA AATTTGCCAA AGCGGAAAAT
AAGCCATTTT TGATATATCG TTTTGATGCA GAGTCTTGGG ATTTACTTCA ACCCCTATAC
CAAATGGAAA AAATTGATTG GGATAGTAAT AATCCAATTT TTAAATTGAA GACGGTTGAA
GAGATTAAAA AATTGCACGC TGCGAAAGAT TATATTATTG ATTTTAAAAA TGAAATTGGC
TCAATATTTG GCCCAAATTT GAATAGTGAA TCAATATCTT TGATATCTGA ACATTTAGCG
GAAAATATTG TAAAGTGGTA TTATGAGGGA AGGATTGCTT TCCAAGAATT TTATGGACGA
AAAACGGAAT TAAAACAACT TATAGAAAGA ATGAATGAAA GTATTGAGGT CTATGGGGTT
GGTGGAATCG GAAAAACCAC CCTCATCCAT GTGGCACTTC TAATACAAAT GTTAAAAGGG
AGAAAGATAC TTGCCATTGG GAAAAAACAA TCTTATCTTT CAGGATCCGG GTATAATTTG
TTTAAGGAAA AATGTCCGAA TGTAATGTAT GAGATTACAA CGGATAGAAT CACACTTAAT
GATATAATTG ATGCACTTAA ATTTAGAGAG GTCCATAAGA TAGAAGGATT AAATGATAAA
ATTCAGTTAA TCCTATCAAA AATTACTACA GACAAATATT TAATTTTTAT TGATGATTTT
CATCTTGCAG ATCAAACTGT CAGACAATTA GTAAAGGAAT CCAATAATTT TATTATTTCC
GCAAAAAAGA AAAGTGGCAT TACACGAAAT GAAGTCCCCT TATTGGGGAT TAATGATCCT
GAAAGAAGTG CATTAATTAA ATTGATCTCT CAAAGATTTG GTAAAAACTT AAAACCGCAA
GATATCCAGA GAATTTCTGA TTTTTCTGAA GGGCATCCAA TAACAATGGA AATATTGATA
AGGAATATAG AAATTATAAA TTTTGAAAAG TTAAATGACT ATAAAAAAGA CGTCTTGGAT
TTTTCGAATT CCGAACAAGT GGAAGAATTT ATCAATCGTG TTATAGAGGG TATTCTTTCA
AGAGAGGCAT TCACCCTTTT AAAAAATATA GCTATGATAA ATACTGTTAT CGAATCAAAT
ATTAGTCTGT ATGTAGTTGA AAAGGCATTT AGAGATCCAC CATCCGCCAA ATATTTTGTC
GAATTAATTA ATTCAGGAAT ACTAACCAAA AAGGGGAATG AGGAGGGGTC ATATCTTTTT
ACCTTTAAAC ACATCCAGGA TGCAGTTCGT GAAGATACCG AGCAATATAA TAAAAGCGCA
TTATCGTATT ATGAGAGTAA AAGAATCTGG CTAAAAAAAT TTACAATTGA TGATGAAATT
GAGAGATTTT CTCATCAAAT AAAATCACGT AGCTCCATTA ATTATTTAAA AACATTCAAT
AGATTGGCGA GTAAAGTTAG TCCAATAAAT TTTGGATATA AAAAGCTTAT TGAAATTGGA
CTCTCTCTAA AAGAACGAAC AACAATAGAT GATGAGAAAG CAACACTATG TAATAATATA
GGAATATTAG TTGGGGATTT AAATCATTAT CGAGATGCTA AAGATTTGTA TAAAGAGGCC
ATTGATATAT ATCGAAGATT ATCAGAACGA AATCGGGAAT CATATACTTC CAATCTTACC
ACTGCTTTAA ATTGTCTTGG AAATTTATAC TTGAATATAA ACAAACTTGA TCAGGCAAAA
GAATGTTACG AAAATGCCTT AAAATTGTTG AAGGGTCTAA ACAATAAAAC AATAAATTCT
GAATTGGGCC AAATATCTAG CATTCTCACA AACTTAGGGA TCGTTTATTC ATCAATTAAT
AGACCTTATG ATGCAAAAAA TTCCTTTTTA GAAGCATTGA GAATTCAAAG GATTATGGCT
AAAAAAAACC CAATGGGACA TTTACCTACA ATTTCAAAAA TTATAATGAA TTTGGGCAAT
TTATCCTCGT TTTTAAATGA TTATGCGGAT GCGCTAAAGA AATATAAAGA AGGCGTTAAA
ACTGCAAAAA CACTAGCGAA AAATAACCCT GCCCAATATT TAATTTTATA TGGGTTATCT
CTAAATTCAA TAGGATCATT ATACGATCGG TTACATAACG ATAAAAAAGT TGAAGAATAT
TTTACGTTAT CCGTAAACAT TCTAAAGGAT TTATCCGAAA AAAATCCTGA TGCTTATCTA
CCAGATTATG TTCAAATTTT GACTAATTTT GCGAATTATT ACTTAAAATC AAATGATATT
GTAAAAGCCA CAAATTATGC AGAGACTGCC TTAAATCAGG CAAAAATTTT GGCAAAACGA
TGTCCAGTTG CATACAACCC ATTACTTGCT CAAATACTCA TAGTCTATGG GGACCTGTTT
TCCCAACTTA ATCGTCCCGA TCATGCCTCC CAATTTTACA ATGAAAGTTT GGTATTATTA
TTGGAATTAA ATCAGCAAAG TCCCGGAGCA TATGTTAATA ATATATCAAG TGTCCTACTT
CAACTAGGAA CGACGTATGA ACAATTGAAT AAATATTCAG ATTCGCAAAC AACATTAGAC
GAATGTTTAA ACCTACGTAC GAAACTTGTA ACGTTATGTC ATGATGCTTA TCTAGATGAT
TATAATGATG TTTTATTGGC ACAAATTTGT TATAAAGAAA AACAAAAAGA TTTCAGTTAT
GTCGAATCTT TAAAAATATG TGAGGACTAT GCGCGAGAAT TACATAGTAA GTGCCCTCAA
GCTTTCAAAT TAAAGTTAGT GAACATACTC CAAATCAAGG GTAGATTGTA TGCAGTACAG
CATAACCCCC ATTATAATAT TATATTTAAC GAATGTCTTC AGCATGCAGA TGATCTAATA
AAAATATCCC CAAATTCATT TACGCCGTAT TATGGTGCAC TTAATTCGTG CATCGGGTAT
TGCCATATGA TTAATAATAA TTTTGTTGAA GCTGAAAAAT ATTTGACTCG ATCATTATCA
ATTTTAAAGG TTGGGTACAT GAATTATCCA GATGTTTTTA GTATTGACTA CTCAGATGCC
CTAAATAATT TTGGATTATA TTATTTAATT CGGAATCTCC CGGACGAGGC TGAAAAGTAT
TTGCAGGAGG CCCTACAAAT TCGAGAGGAT TGGACAAAAA AATGTGCTAT ATCATATAGT
GCGGACTACT CAAATTCATT GAACAATATG GGTTACTGTA AACTTCTTCA GCAATTATCT
AATGATGCAG AAATCTACTT AACTCGATCA CTCAATATCC AAAAAGAACT AATTTTAACG
AATCGAAATA TTTTTAGCGA GGAGTATGCC CGACTGAAAC GAAATCTTGG CAAATTGTAC
CTTGTAAAGA ATAATTACCC CGAATCCAAA ATTCATTTTG AAGAATCAAT AAAGATTCAA
AAAGAATATA CAGAAAAATA TCCGGATATA TTCAAAATTG ACTATCGAGA AACTTTAATT
GCATATTCCG AATTACTTTC AAAGATGGGA ATATCCGATG AATTAAGTAA GGTGACGAAA
TTGATAGAAG AATGTTGA
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| Protein sequence | MTLMINRKSK GLLKVFISST FRDLQAERQQ LYEKLSESIS PVGMEFFIPD GKTSHEISLL
DEDQGLKNSD IVIFLISPYY GSLIEKCNIP TCKADCPLKN GTKQKISYTH CEFKFAKAEN
KPFLIYRFDA ESWDLLQPLY QMEKIDWDSN NPIFKLKTVE EIKKLHAAKD YIIDFKNEIG
SIFGPNLNSE SISLISEHLA ENIVKWYYEG RIAFQEFYGR KTELKQLIER MNESIEVYGV
GGIGKTTLIH VALLIQMLKG RKILAIGKKQ SYLSGSGYNL FKEKCPNVMY EITTDRITLN
DIIDALKFRE VHKIEGLNDK IQLILSKITT DKYLIFIDDF HLADQTVRQL VKESNNFIIS
AKKKSGITRN EVPLLGINDP ERSALIKLIS QRFGKNLKPQ DIQRISDFSE GHPITMEILI
RNIEIINFEK LNDYKKDVLD FSNSEQVEEF INRVIEGILS REAFTLLKNI AMINTVIESN
ISLYVVEKAF RDPPSAKYFV ELINSGILTK KGNEEGSYLF TFKHIQDAVR EDTEQYNKSA
LSYYESKRIW LKKFTIDDEI ERFSHQIKSR SSINYLKTFN RLASKVSPIN FGYKKLIEIG
LSLKERTTID DEKATLCNNI GILVGDLNHY RDAKDLYKEA IDIYRRLSER NRESYTSNLT
TALNCLGNLY LNINKLDQAK ECYENALKLL KGLNNKTINS ELGQISSILT NLGIVYSSIN
RPYDAKNSFL EALRIQRIMA KKNPMGHLPT ISKIIMNLGN LSSFLNDYAD ALKKYKEGVK
TAKTLAKNNP AQYLILYGLS LNSIGSLYDR LHNDKKVEEY FTLSVNILKD LSEKNPDAYL
PDYVQILTNF ANYYLKSNDI VKATNYAETA LNQAKILAKR CPVAYNPLLA QILIVYGDLF
SQLNRPDHAS QFYNESLVLL LELNQQSPGA YVNNISSVLL QLGTTYEQLN KYSDSQTTLD
ECLNLRTKLV TLCHDAYLDD YNDVLLAQIC YKEKQKDFSY VESLKICEDY ARELHSKCPQ
AFKLKLVNIL QIKGRLYAVQ HNPHYNIIFN ECLQHADDLI KISPNSFTPY YGALNSCIGY
CHMINNNFVE AEKYLTRSLS ILKVGYMNYP DVFSIDYSDA LNNFGLYYLI RNLPDEAEKY
LQEALQIRED WTKKCAISYS ADYSNSLNNM GYCKLLQQLS NDAEIYLTRS LNIQKELILT
NRNIFSEEYA RLKRNLGKLY LVKNNYPESK IHFEESIKIQ KEYTEKYPDI FKIDYRETLI
AYSELLSKMG ISDELSKVTK LIEEC
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