Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2018 |
Symbol | |
ID | 5411899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2090953 |
End bp | 2092365 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640869260 |
Product | major facilitator transporter |
Protein accession | YP_001405175 |
Protein GI | 154151557 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.132894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.221314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA CTCCCCCTCT TACTCCTGCG GAATTTGCCC ACCGGTACCG CATCCCCATC CTCCTTGTCA TCCTCGTGGG CGTCTTCATG GCCGTGCTGG ACAACAATAT TGTTGCCATC GCGCTTCCGA CGATTACCAG CGACTTTAAC GTGCCGCTGG GCCAGTCCCA GTGGATTGCA ACAGCCTATA TCATCACGAT CATTGCTACC GTGCTCATCT TTGGCACCCT CTCCCCGGTG CTTGGCAAGG CCCGGCTCTA CATCTGCGGC ATGGCCCTCT TTGTGGCAAG CTCTGCTGCC TGCGGGCTTG CACACACACT CCCCCTGCTC GTCCTTTCGC GGATCGTACA GGGGATCGGG GCCGCGATGC TCATGTCCAT CTCCATGGCC ATCATCATGC AGGTCTTCCC CCTGCACGAG AGGGGTAAGG CGCTCGGGTA CGTGACAGCC ACGGTCGGCC TTGGCCTGAT TATCGGCCCG GCCCTTGGCG GCGTGCTCGT GGAAGCCCTT GGCTGGCCGT ATGTCTTTTT TGTCAACGTC CCTATCGGGA TCGTCATGCT CATTCCCGCT GTGCGCTACC TGAAACTGGA GGAGACCGGT TCGAAAATCG GAAAGCTCGA CAGCCCCGGG ATTGCACTCT TTATCGCGCT GATGGCAGGC GTTGCCCTCT TTGTCAACGA ACTGGCAAAC CCGCCGGTGA ATATGACCTC TCTCTCCGCG TACGCCGTCT TTACCCTCGC TGCGCTTGCC GCATTTGTGC TCCGCGAACG GTCTGCCCGA AATCCGCTCA TGGACCTCTC CCTCTTTTCC GACCGGCGCT TCGTGCTCCC CTCGGCAAGT CTTGTCCTGT ACTTTGTTGC CACTTTCATT CTCATCATCA TCCTGCCGTT CTACTTCGAA GGAGTCATGG GCTGGAAACC CCTGCAGGTG GGCCTTGTGG CCTTTGTGAT GCCGGTGGCC ATGATCGTGA GTGCCCCCGT TTTTGGCAGG ACGTATGATA AGCGGCCCTC AAAGAATTAT CCCGCCATAG GTGTGCTTGG GATGGGCGGG GGGTTTTTCC TGTGCGGGTA CGGGTTTGCC ACGCAGAGCG TCCTTGTCAT CGTGATAGCG CTCATCCTTG CCGGCCTCTT CCGCTCGATC TTCCAGGGCC CAAACACCAT CGAGATCATG GGGTCGCTCC CGGCAGAAAA GGCGGGGATC GCATCAAGCC TGCTCGTGAT CCTCCAGGAC CTCGGGATCC TGCTTGGGAT CTCCGCGGGA AGCATCCTTC TGGTCCTCCA GCTCAATGCG CTTGGCTACA CCGGCGCTGT TCTCGATGCC GGGGCGGGGA TGCTCCCGCC GATCTTTGCA AATGCCATGT ATGCCGGCGG TCTCTGCTGT GTGGTGGCGG CCATGGTCAC CTACAAACGG TAA
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Protein sequence | MTETPPLTPA EFAHRYRIPI LLVILVGVFM AVLDNNIVAI ALPTITSDFN VPLGQSQWIA TAYIITIIAT VLIFGTLSPV LGKARLYICG MALFVASSAA CGLAHTLPLL VLSRIVQGIG AAMLMSISMA IIMQVFPLHE RGKALGYVTA TVGLGLIIGP ALGGVLVEAL GWPYVFFVNV PIGIVMLIPA VRYLKLEETG SKIGKLDSPG IALFIALMAG VALFVNELAN PPVNMTSLSA YAVFTLAALA AFVLRERSAR NPLMDLSLFS DRRFVLPSAS LVLYFVATFI LIIILPFYFE GVMGWKPLQV GLVAFVMPVA MIVSAPVFGR TYDKRPSKNY PAIGVLGMGG GFFLCGYGFA TQSVLVIVIA LILAGLFRSI FQGPNTIEIM GSLPAEKAGI ASSLLVILQD LGILLGISAG SILLVLQLNA LGYTGAVLDA GAGMLPPIFA NAMYAGGLCC VVAAMVTYKR
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