Gene Mboo_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2014 
Symbol 
ID5411895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2085569 
End bp2086333 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content53% 
IMG OID640869256 
Producthypothetical protein 
Protein accessionYP_001405171 
Protein GI154151553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0836382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA CGCCGGATAT GTATTCTCCT CCGGACCCCC CCGCAAAAGT GCAAAGCAAT 
AAACAAATGT TTTTAAATCA ATTTTACCGC TTTCGTGATG AGAGAACAAA AATGAAAACA
ACAATTCTGC CGTGCAGCGT ATATCCTGGA AAAGTGATCC GGGCGGTTAA AATTCCCTCA
GTCATTGTCG TGTTCGCCGT TCTGGCCGCA GTTATCGCCT TTGCCGGCTG CACCACTTCG
GCTCCCCCTG AAGTGGTGAT CACCTCGCCC CAGGACAATG CAACGATCAC CGGGAGCGAT
GTTACCCTGA ATATCCAGGT CAGTAATTTC GCGGTCTCCT TTGGGTCCAC GGATATGAAC
AGTATGAATA ACGAGCAGAA CCAGGCTGGT ACAGGGCATA TCCATTGGTA CATGGACGTT
CCGGTGCCGA CCGTTCCCGG GGAGATGGCA GTAACCGCCA ACGGTACCTG GCAGATGCAG
GATGGCACCA GTTATACCTG GCACAATGTC CAGCCGGGCA CCCATACCTT CTCTGTACAA
CTCGTGAACA AGGATATGAC CCCCCTTTCA CCGCCGGTAT ACCAGACCAT CACGGTCATT
ACCGTGCCGG GCGCAGCAGC AGTGCCGGCC AACCAAACAG CCACCCCGGT AAGCACGCCG
GCGGCCTCCA TGACCGGAAG TTCAGGCATG AACATGAACA GTGGTTCGGG AGGAAACATG
ACCATGAACA GCGGTACCCC TTCGGGTACG ATGTCATCAT CATAA
 
Protein sequence
MTDTPDMYSP PDPPAKVQSN KQMFLNQFYR FRDERTKMKT TILPCSVYPG KVIRAVKIPS 
VIVVFAVLAA VIAFAGCTTS APPEVVITSP QDNATITGSD VTLNIQVSNF AVSFGSTDMN
SMNNEQNQAG TGHIHWYMDV PVPTVPGEMA VTANGTWQMQ DGTSYTWHNV QPGTHTFSVQ
LVNKDMTPLS PPVYQTITVI TVPGAAAVPA NQTATPVSTP AASMTGSSGM NMNSGSGGNM
TMNSGTPSGT MSSS