| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2010 |
|---|
| Symbol | |
|---|
| ID | 5411891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2080019 |
|---|
| End bp | 2081365 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640869252 |
|---|
| Product | nitrogenase |
|---|
| Protein accession | YP_001405167 |
|---|
| Protein GI | 154151549 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.696694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.320293 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGAAG CAGAAACCGT ACCTCAGGAT ATTGATACCC GGTACCCCGA GGTTGTGGAG
GCACCGCGGT GGACCTGCTC ACTTGGGGGA GCATACATTA CGAGTACCGG GGTCTACGGA
GTAGTCCCCA TCCTCCATGC CGGGGCAGGC TGTGGCATTG CTCAACTGCT TGGCGTGTAC
TATGCAGCGG GTGAGAATGC TGCCGGCGGG CAGGGCGGGA CGAGCACTCC CTGTTCATGC
CTTATCGAGA AGCACGTGAT CTTCGGCGGG GAGGACAAAC TCCGGAAGCT GATCGATTCA
ACGATCCAGC TGATGGAGGG CGATCTCTAC GTGGTAATCT CCGGGTGTGT CCCGGCGCTG
ATCGGAGACG ACGTTGACTC CGTAGTCAGG GAGTTCAAAG GGAAAGCAGA TGTCATCTTT
GTTAATACCG CCGGGTTCAA GGGCAACACG TTCGATGGCT ACGAGGAGTT CCTAGGTGCG
GTCATTGACC AGTTCCTGGA ACCAAGGAAA AAGAAGAAGA AGGTTGTCAA CATCCTCGGG
GTCGTTCCCT TCCAGCACGT CTTCTGGAAA GGCGACCTCA ATGTCGTCAA GAACCTGTTG
GCAAAGATCG GCGTGGAGGC AAATATCCTC TTCACCCAGT TCGATGGCGT CAAAAAACTC
AAAGAGATTC CGGAAGCGGA ACTCAACATC GTCCTTTCCA CCTGGAACGG GCACAAGGCT
GCCGGAAAAC TCAAAGAGAG ATTCGGCCAG GAATACCTGA CGTTCCCAAG CCCGCCAATC
GGGCCGAAGC AGACGTCAGA ATTCCTCCGC TCCGTGGCAA AGAAACTCAG GATCCCCAAA
AAGGATGTGG AACGGGTCAT CGCAGAGGAA GAGCGGCACG TATACCGGTT CACCGAGTAC
CTGACCGATG CAATCATCAT AGGCCTTCCC CATCCGTACG CAGCCTTTGT CGGGGATTCC
AACACCGTAA TTGGCATTGC AAAATACCTT GCAAACGAGG TCGGGTACCT TCCCGAGGTG
GTGCAGATTA CCGATGAACC CCCCGAGGAA GCCCGGGAGT GGATCCGGCG GGAGCTGACC
GAGAACATCG AGTCCACGAT CAAACCGGAT ATCCTCTTCG AGAAAGACAC GTTCCGGATC
CGTGAGAACC TGCGGGACAG GAGTTTCCAA GTCATGCTCG CCACCTCGCT TGAAAAGTGG
CCTGCGGCAA AGGAATTCGG CGTTGCCCAC CTGAGTGTTG GTTTCCCGAT GTACGATCGC
GTTATCGTTG ACCGGAACTA TGCCGGGTAC AGAGGCGGGC TTGCTCTTCT GGAAGACCTC
ATCGCCAAAT ATGTCGGCCC TCTTTAA
|
|---|
| Protein sequence | MTEAETVPQD IDTRYPEVVE APRWTCSLGG AYITSTGVYG VVPILHAGAG CGIAQLLGVY
YAAGENAAGG QGGTSTPCSC LIEKHVIFGG EDKLRKLIDS TIQLMEGDLY VVISGCVPAL
IGDDVDSVVR EFKGKADVIF VNTAGFKGNT FDGYEEFLGA VIDQFLEPRK KKKKVVNILG
VVPFQHVFWK GDLNVVKNLL AKIGVEANIL FTQFDGVKKL KEIPEAELNI VLSTWNGHKA
AGKLKERFGQ EYLTFPSPPI GPKQTSEFLR SVAKKLRIPK KDVERVIAEE ERHVYRFTEY
LTDAIIIGLP HPYAAFVGDS NTVIGIAKYL ANEVGYLPEV VQITDEPPEE AREWIRRELT
ENIESTIKPD ILFEKDTFRI RENLRDRSFQ VMLATSLEKW PAAKEFGVAH LSVGFPMYDR
VIVDRNYAGY RGGLALLEDL IAKYVGPL
|
|---|
| |