| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2006 |
|---|
| Symbol | |
|---|
| ID | 5411887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2075350 |
|---|
| End bp | 2076537 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640869248 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001405163 |
|---|
| Protein GI | 154151545 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.151013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.929725 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGAC TTATTGCCCG TAGTATTATT CACCGCCCGG TAAGAAACGG GGCCCTCATT
CTGGCGTTTG CCTTCATAGC TGCAAGCCTC TTCTCCAGTC ACTACCTGCT CGCCGGTGCT
TCAGACAGTG TGAAATCCGA AATTGCGAAA CTGGGGGCAG ATATCATTGT AGTGCCTCAG
GAGTATACCG CTGACAGCGA GGCGGTTCTC CTCAGGGGAG AACCCTCCAC ATTCTTTTTT
AATGATTCTG TGGTCCCCCT CATCAGGAAT GTCTCCGGTG TTCAACAGGT TGAACCACAG
ATCTTTATTG CGACCCTTTC CGCGAGCTGC TGCTCCCTTC CGGTTCAGCT CATTGCCATT
GATCCCACCC AGGATTTTAC GATTACCCCC TGGCTCGAAG CAAACCAGCA GAAACCGCTT
GGTCAGGACG AAATCATAGT CGGGAATAAA ATAGTGCCCC AGGTCGGGTC CAATCTTACG
TTTTATGGTC ACACTTTCAG GATCGTGGGA AAACTCGATC CCACGGGGAC CGGACTGGAT
ACCTCGATAT TTCTCCGTAC TGCTGACGCA TATACGATGG CAGAGGAGTC AAATAAAACC
GCGGTAAAGC CGCTTGTCCT TCCCAAGGGT GTTGCGTCTG CCGTACTTGT ACAGGTGAAT
GACGCCGCCG AGACGACCAA TGTGTCCTAT CGCATCGTAG AGCAGGTTCC CGGAACAAGA
GTACTCACTT CATCGGCCCT GGTCAGCACG GTATCCGATC AACTGGCAGG AATTACGCAG
ATTCTTGATC TCTCTGCGCT TGTCGCCACG CTCATTTCCC TGCCCCTGAT TGCCCTGATA
TCGCTGATGG TAGTAAATGA ACGCCGGCGG GAGATTGGGG TGTTGCGGGC CCTTGGGGCT
ACACGGGCAA TGATATTCCG TCTTATCCTC GGGGAATCGG TTATTATTGC AGCGATCGGG
GGCATCCTGG GGATTGCATC ATCCTGGATC ATTCTCATAC TGTTCCAGGG TTATATTGCA
GAGGTCACCC GTATCCCCCT CTCCATGCCG GTTATATCAT CCCTTGGATA CATTTCTGCT
CTCACCCTCA TTGTGACCGT GGCAGTTGGC GGTCTTGCAG CGCTCTACCC TGCCGTGCGG
AGTGCACTCA TCGAACCCTA TGAAGCGATA CGGAGCGGTG AACTATGA
|
|---|
| Protein sequence | MFGLIARSII HRPVRNGALI LAFAFIAASL FSSHYLLAGA SDSVKSEIAK LGADIIVVPQ
EYTADSEAVL LRGEPSTFFF NDSVVPLIRN VSGVQQVEPQ IFIATLSASC CSLPVQLIAI
DPTQDFTITP WLEANQQKPL GQDEIIVGNK IVPQVGSNLT FYGHTFRIVG KLDPTGTGLD
TSIFLRTADA YTMAEESNKT AVKPLVLPKG VASAVLVQVN DAAETTNVSY RIVEQVPGTR
VLTSSALVST VSDQLAGITQ ILDLSALVAT LISLPLIALI SLMVVNERRR EIGVLRALGA
TRAMIFRLIL GESVIIAAIG GILGIASSWI ILILFQGYIA EVTRIPLSMP VISSLGYISA
LTLIVTVAVG GLAALYPAVR SALIEPYEAI RSGEL
|
|---|
| |