Gene Mboo_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2005 
Symbol 
ID5410429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2074858 
End bp2075346 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID640869247 
Producthypothetical protein 
Protein accessionYP_001405162 
Protein GI154151544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.462321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.796395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCGG TTGGAAAAAC ACAAAATCTT ATCATTACAG GAATTTTCAT TCTCCTTGGC 
CTGCTTATTG TGCTGACGCC GTGGTATATC TTCCCGATCT GTGAGATCGC CGAAAAGTCG
GGGTCCATGC AGATGGGAAC CAGCGGTGAC AACTCCATGA ATATGAACAT GGACAGTGGT
ACGCACATGG TCTGCTGGTA CACCGCCGAA GCAGAAGCGG GTACCGGAGC GCTGGTGATC
CTCGTCGGGC TGGTCCTGTT CGCGCTGCCA AACCGTGATT CACGCCGGTC TCTTGGGGTT
ATCGCTATTG GCCTTGGGGT CGTCACCGTA CTATTGCCGA CCTACCTTAT CGGGATGTGT
ACCTCTTCCC CGGACACTCC GTGCAATATA GGGACAAAAC CTGCACTGAT CCTTTTGGGA
GTACTCACTG CAATTACCGG CATTTACCTG TTCCTTGCAA AGGGCGATTC CCCAACCCAA
CCGGTCTGA
 
Protein sequence
MVSVGKTQNL IITGIFILLG LLIVLTPWYI FPICEIAEKS GSMQMGTSGD NSMNMNMDSG 
THMVCWYTAE AEAGTGALVI LVGLVLFALP NRDSRRSLGV IAIGLGVVTV LLPTYLIGMC
TSSPDTPCNI GTKPALILLG VLTAITGIYL FLAKGDSPTQ PV