| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2001 |
|---|
| Symbol | |
|---|
| ID | 5410425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2069245 |
|---|
| End bp | 2070378 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640869243 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001405158 |
|---|
| Protein GI | 154151540 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0502] Biotin synthase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATT ACCTGTTACT AAAGGCGGCC CTTGTCACCG AGGGGATACG GTCAGATCCT
GCAAGCGTTG CAGAGGTCGG GACCCGGTAC AAAGAGCAGA ACCACGGTCT CTTTGGCTGG
GATTTTGAAA ACCACACCGA GCAGAAACTC CCCGATGACT TCACCCTCCC CGACGGGACC
GTGGTGCAGT ACCGCAAGAA TTCGCGTTCA CCGTACCACG TGGTGCCCGA GGATGGCAGG
CTGCACCTGC ACCATAACGA GCAGCGGATC TGCGAGGTGA AATGGCTGCG GCGGCCCCGG
TATTACACAG AAAAGACCAC AAAGGGAAAC GACATGATAA AGATCGGGCA GCTCGGCGGG
CAGGACTGCC TCTTTTTCTG CTACCAGAAC TACTGCTCCC ATTTTGCCAA AAAACAACAG
TGCGCCTTCT GCAACCTGGT CTCCACCTCA GATGTGTACA ACTCGGTCAT GAGAAGAAAG
GACCCGGTTG AAGTGGGAGA AGTTGTGAAA GCTGCATGGG CGGAAGGCGA CACCAACCAC
GTCAACCTCA CCGGTGGGTG CATCTCCCTG AAGCGGGAGA TTGAGATCGT TTCGGAGATC
CTATCCTCGA TCCGGGAGCA CACGGGCTTT GATTCGGTGC CAGGAACCCT TCTTCCCTCG
CCGGCCAAAG GAGAAGCGAT CCAGAAGTTC TACGAGACCG GGATTGGGTC ACTCTGCTTT
GCCATGGAAG TCTGGGACAA AAAATACTAC GAGGCAATCT GCCCGGGGAA GGCTGCGGGC
ACATCGCATG ATGAGTTTGT GGAAAACATA AAAAAAGCAG TGGAGGTCTT CGGTGAAGGC
AATGTGTATA CGATCTTTGT TCTGGGCCTG GAACCAAAAG AGAACTTCCT TGCCGGCGTG
AATGCTATCT CGGAACTGGG AGCAAACGTA ATCCCGTTTG TCTGGTCCCC GAACCCCGGC
TCGAAATTGT ACGGCCATCG CGCCCCATTT GCAGAATGGT ACGCACAGAC TAACCGCGAG
GCGGCGGAGA TTGTCCGTGA GCATAAGGTC CCTGCAGGCA CCCGGAACCA CTGCTACCTC
TGCGATGGGA ACTCCCTGTT GCACGATGCA CTCCGGGAAA AAGGAGTTGT GTGA
|
|---|
| Protein sequence | MEDYLLLKAA LVTEGIRSDP ASVAEVGTRY KEQNHGLFGW DFENHTEQKL PDDFTLPDGT
VVQYRKNSRS PYHVVPEDGR LHLHHNEQRI CEVKWLRRPR YYTEKTTKGN DMIKIGQLGG
QDCLFFCYQN YCSHFAKKQQ CAFCNLVSTS DVYNSVMRRK DPVEVGEVVK AAWAEGDTNH
VNLTGGCISL KREIEIVSEI LSSIREHTGF DSVPGTLLPS PAKGEAIQKF YETGIGSLCF
AMEVWDKKYY EAICPGKAAG TSHDEFVENI KKAVEVFGEG NVYTIFVLGL EPKENFLAGV
NAISELGANV IPFVWSPNPG SKLYGHRAPF AEWYAQTNRE AAEIVREHKV PAGTRNHCYL
CDGNSLLHDA LREKGVV
|
|---|
| |