| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1995 |
|---|
| Symbol | |
|---|
| ID | 5410419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2060288 |
|---|
| End bp | 2061499 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640869237 |
|---|
| Product | Cys/Met metabolism pyridoxal-phosphate-dependent enzyme |
|---|
| Protein accession | YP_001405152 |
|---|
| Protein GI | 154151534 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCCG AACCATCGCC CGTACGGGGG ATCCGTACAA CTGCAATCCA TGCCGGGGAG
TCCCCTGACC CGGTGACCGG GGCCTCGGCC CCATCGATTG TGATGTCAAC TGCGTTTGTC
GCCGATGCCG GCGTTTCGTT CTCGGCCGAG GACTTTGGTG ACAACACCCC GTACCTGTAT
ACCCGGTGGA AGAACCCCAC GGTCGACCAG CTCGAAAAGA AGCTTGCCGC ACTTGAAGGA
GCCGGGGGAT CCGTTGCATT TGCAAGCGGA ATGGCGGCCG TGACGGCACT TCTCCTCTAC
ACCCTCAGGG CCGGGGACCA CCTGGTCATC AGCGATATCT CGTATGCCGC AACAGCGGAG
ATGACCAATG AGCTGCTCCC CCGGCTTGGT ATCGGCGTAA CCAAGGTGGA CATGTCCGAC
CCGGCCAATG TGAAAGCCGC TTTGAGGCCC AATACGAAAC TTGTCTATGC CGAATCGCCC
GCAAACCCGA TTCTCAGGCT TACCGATCTC GAAGCGGTTG GCCGGATCGC CCACGAAAAA
GGGGCCCGCT TTGCGGTGGA TGCCACCTTT GCCTCGCCGA TCGGGATCCA ACCCACGCAG
CTGGGGGCAG ACTTTGTGCT CCACTCCCTG ACCAAGTACA TCAATGGCCA CGGCGACGCA
ATCGGTGGGG CGGTAATCGG CAGCGCACAG GACATGGCCG CAATAAAAAA GGAGATCGCA
ATCCGTACCG GCGGGATCTT AAGCCCGTTT AATGCCTGGC TGATCCAGCG GGGCGCAGCC
ACGCTCCCCC TGCGGATGAG GGCTCACGAG GAAGGTGCCC ATGCGGTTGC GCAGTTCCTT
GAGGAGCATC CGAAGGTGAC CCGGGTAATC TATCCCGGCC TTCCCTCGCA CCCCCAGTAT
GCGCTTGCAC AAAAACAGCT CAAAAATACC TCCGGCATGA TCACGTTCCA GGTAAAAGAC
GGCCTTGCCG CTGCACCGGT GATCGCAAAA CGGCTCTCGG TGATCCACTA TGCGGTCTCG
CTTGGCCACC AGAGGAGCCT GGTCTTCTAC CTGCCCACGC GCGATATGCT CCGGACCTCG
TTTAAGCTCA CCCCGGCGCA GGAACAGTCC TTCCGGGCCT TTGCCGGGGA CGGGATCTTC
CGGCTCTCGG TGGGCCTTGA GGACCCGGCC GATCTTATCG CCGACCTCGC CCATGCCCTG
GACGGGATCT GA
|
|---|
| Protein sequence | MTPEPSPVRG IRTTAIHAGE SPDPVTGASA PSIVMSTAFV ADAGVSFSAE DFGDNTPYLY
TRWKNPTVDQ LEKKLAALEG AGGSVAFASG MAAVTALLLY TLRAGDHLVI SDISYAATAE
MTNELLPRLG IGVTKVDMSD PANVKAALRP NTKLVYAESP ANPILRLTDL EAVGRIAHEK
GARFAVDATF ASPIGIQPTQ LGADFVLHSL TKYINGHGDA IGGAVIGSAQ DMAAIKKEIA
IRTGGILSPF NAWLIQRGAA TLPLRMRAHE EGAHAVAQFL EEHPKVTRVI YPGLPSHPQY
ALAQKQLKNT SGMITFQVKD GLAAAPVIAK RLSVIHYAVS LGHQRSLVFY LPTRDMLRTS
FKLTPAQEQS FRAFAGDGIF RLSVGLEDPA DLIADLAHAL DGI
|
|---|
| |