Gene Mboo_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1981 
SymbolubiA 
ID5410235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2045006 
End bp2045857 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content44% 
IMG OID640869222 
Productprenyltransferase 
Protein accessionYP_001405138 
Protein GI154151520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.650334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.466144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCT TTGGCAACCC AACCTTTCGG CTTCTGAATT CATCAACAGT AGTTGCAATA 
GGAGGAGGGC TCCGGCTGCA CATCGCCTTT CTCCTTGCAG GTCTCGCAGT TCAGATACCC
GAATATTGCG CCTGTGCCCT GATCATTTAT GCTACTTATA CCCTTGATCG GGCGCTCGAT
TGTAAAGAAG ATGCAATCAA CAAACCCTCA CTTATAGGTG CAAATGGCAG AATAGGGATC
CTTGCCTGCA TTGTTGCATT TCTTCTGGGT ACCTTTCTCT TTGTACGCGA CGGGATTTAC
CTGGCACCCT TTTTCCCGTT CATTGTCGGG TATATTTACA CAAGAGGTCT ACAAATCGGA
CCTTATGCAT TCAAACTCAA AGGTGGAGCC GGGATAAAAA ATATTATCAT CGGCATAAGC
TGGGGAGGAG CGATCGCACT TGTCGTAAGC CGTTACTGCG GCAGTATTGC AACTGTCGGT
GTGATCTTCC TTTTCTTTGG ACTAAAACTG TTTGTCACTT CATGTGTGAA TGATTTCAAA
GATGTTCGCG GTGATGTGGC TGCCGGCATT CACACGCTCC CTGCATATCT TGGAGAGAAT
CTGACAAAAA AAGTCCTGGT GATCATTATT GTTGCGCTTC ACATCGTGAT GGCTTATGCA
GTGTTTTTCC ATGTTATCCA GAATGAATGG ATTATAATCG TGTACAGTTT CGTAATTACC
TCATCCTTCC TTCTTGTATA CTCATCATCA TTTGAAAAAA GCTCGCTAAT TATCTGCCGG
AGGCTTCGAG AAATCGTTAT TTACTGGGAA TCGGCCATAA CACTGGTAAT CCGGTCATGT
ATAATGGCCT AA
 
Protein sequence
MSIFGNPTFR LLNSSTVVAI GGGLRLHIAF LLAGLAVQIP EYCACALIIY ATYTLDRALD 
CKEDAINKPS LIGANGRIGI LACIVAFLLG TFLFVRDGIY LAPFFPFIVG YIYTRGLQIG
PYAFKLKGGA GIKNIIIGIS WGGAIALVVS RYCGSIATVG VIFLFFGLKL FVTSCVNDFK
DVRGDVAAGI HTLPAYLGEN LTKKVLVIII VALHIVMAYA VFFHVIQNEW IIIVYSFVIT
SSFLLVYSSS FEKSSLIICR RLREIVIYWE SAITLVIRSC IMA