Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1978 |
Symbol | |
ID | 5410801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2041042 |
End bp | 2042253 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640869219 |
Product | hypothetical protein |
Protein accession | YP_001405135 |
Protein GI | 154151517 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03266] putative methanogenesis marker protein 1 [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.154455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.549107 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTT CCTCCTGCAA GAAGACTTAC AGCAACGAGA CCCAGCGTGC CGTACCGCTC GCAGAGACCC TTGCACGCAT AGAGCCGAAG ATCCCCGTTG CCGGCATCAC CCGGGTAGCA GAGATCACGG GTCTTGACAG GATCGGTATT CCTGTCTTCT CCTGCATCCG GCCGACAGCA GAGGATGGGG CGATCACGGT ATACAATGGA AAAGGCGCAA CCGTGGAGGA GTCGCGAATC TCCGGGATAA TGGAAGGGAT CGAACGGTAT TCTTCCGAAA TTCATGATCG AAAAGTCCGG CTTGATACCT ATGAGATGCT TAAAGACCGG GAACCTGTGA TAAATCCTGC AGATCTTATC CTTCCGGCAG AAACACAGCC CGGGCATGTA CTTCCCTGGG TCGAGGGATG GGATATTGCC AACGATGAGC AGCTTCTTGT CCCGGCCCAA GCTGTATTCC ACCCGCTTCC GAGAAATTTC CGTCAGATCT TCCGCACATC CACCAACGGT CTCGCCTCGG GAAATACCCG GGAAGAGGCA ATCTTTCACG CGCTTTGCGA AGTGATCGAA CGGGATGCAT GGTCTCTGGT GGAAGCCACC CGCGATACCG GGCCATCAGT AGTAAATATC AGCGATCCGA TGCTTGCGGA TATGCAGAAG AAGTTTGCCG ATGCGCAGGT GGATGTGATC GTGCGGGATA TCACAAGCGA CATCGGCATT CCCACGATGG CAGCGGTTGC AGATGATGTG CTCCTTAAAG ATCCCTCGTT GCTCACCATT GGGATCGGCA CCCATAGCAA TGCACGAATC GCGGTGATGC GGGCACTCAC TGAGGTAGCA CAGAGCCGGC TTACCCAGAT CCACGGGGCA CGGGAGGATA CAATAACCGC CGAGCTCAGG AAGAAGATGG GCTATGACCG GGCGAAAAGG ATCAACGGTT ACTGGTTCAA GGATAACGGA TATGTGGACT ATGCGGCTCT ACGATCGTTT GACAGTGACG ATTTTGCACG GGATATCCGG GTTGTCATAG AAGCGCTCAA AAAACAGGAT CTGAACCGGG TAATCGTGGT GGATCTGACC CGGGAAGAGG TGGGAATCCC GGTGGTCAGG GTAATTGTGC CCGGTCTTGA GGTGTATGCC ATGGATCCGG AGCGCAGAGG AGAGCGGCTG AGACATGCCA AAAACCATCG TCTTTCTCGG GCCAAGTCTT GA
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Protein sequence | MRISSCKKTY SNETQRAVPL AETLARIEPK IPVAGITRVA EITGLDRIGI PVFSCIRPTA EDGAITVYNG KGATVEESRI SGIMEGIERY SSEIHDRKVR LDTYEMLKDR EPVINPADLI LPAETQPGHV LPWVEGWDIA NDEQLLVPAQ AVFHPLPRNF RQIFRTSTNG LASGNTREEA IFHALCEVIE RDAWSLVEAT RDTGPSVVNI SDPMLADMQK KFADAQVDVI VRDITSDIGI PTMAAVADDV LLKDPSLLTI GIGTHSNARI AVMRALTEVA QSRLTQIHGA REDTITAELR KKMGYDRAKR INGYWFKDNG YVDYAALRSF DSDDFARDIR VVIEALKKQD LNRVIVVDLT REEVGIPVVR VIVPGLEVYA MDPERRGERL RHAKNHRLSR AKS
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