Gene Mboo_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1971 
Symbol 
ID5410794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2035205 
End bp2035990 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content51% 
IMG OID640869211 
ProductFHA domain-containing protein 
Protein accessionYP_001405128 
Protein GI154151510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.364478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGG CAGACAAGTC TCCCACAATT GTCGTTGAGG ATACGGAGGA TTCTCTCGAT 
GAACTCTCGG AATATCTCGA TGTTTTATCG AGCAGCGCCC GATTGAGGAT TGTTAAGTTT
CTCGAAAAGA AACCCCGGGA TGCGCGGGCT ATCTCCCATG AGATTGAGAC CAGCTATGAA
AATACCAAGA AACATCTGGA CAAACTCATG AGTATTGGTG TGATAAAAAA GGAGGCTGGT
TTAGGCTCCC CGACGTCCAA AGGGATTCAC CCGGTCTGGC AGTATTCTCT TGTCCCAGGA
GGTCTTGAAT CCATTATCCG GAATCTCGGA CTCTTCTCCA ACACCAGAGT CCAGATTATC
GGTGGGGAAA TATCACGTCG GCTGGAATCG GTCAAAAATA CTCTCTCCAA GGAAGTGCTC
GGGAATGTTC CCGCAGTAAT TATCCTTGGC GGTCATGATG ATGGCAAAAC ATTCCTGTTG
AGGAACGACG GAGTACGGGT CGGGCGCAGC GATCCCGAAC GCCCCGCCGG GGCAACCGGA
GACAGCGATG TTGAAATTTC CGGATCCTAT ACTGCGGTCA CCCGGATCTC AAAACCTCAC
GGCAGATTCC TCCAGAGAAA AGACGGATGG TATTATGAAG ATTGTGGGAG TACCGGTGGA
TCGATGCTGA ACAATGCGCG ACTGGAGCGC AATACCCCCG TCCAGATTCA CGATGGCGAT
CTGCTGGAAC TGGCAAAAGG CCCGGCCGGG ACAAAGATGC TGTTAATTAT CCCCAAAAGC
CCATAA
 
Protein sequence
MDPADKSPTI VVEDTEDSLD ELSEYLDVLS SSARLRIVKF LEKKPRDARA ISHEIETSYE 
NTKKHLDKLM SIGVIKKEAG LGSPTSKGIH PVWQYSLVPG GLESIIRNLG LFSNTRVQII
GGEISRRLES VKNTLSKEVL GNVPAVIILG GHDDGKTFLL RNDGVRVGRS DPERPAGATG
DSDVEISGSY TAVTRISKPH GRFLQRKDGW YYEDCGSTGG SMLNNARLER NTPVQIHDGD
LLELAKGPAG TKMLLIIPKS P