Gene Mboo_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1964 
Symbol 
ID5410001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2027935 
End bp2028936 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content50% 
IMG OID640869205 
Producthypothetical protein 
Protein accessionYP_001405122 
Protein GI154151504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.833026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACCGGG CGATTGTAAG CCACGATGTG ATCCTTGAGG CCCGTATGAA CTCGACAATT 
CTGGCAGTTA TTCTTCTTAT ATTGATTGTA CTGCCAGTAT CTGCTGATCT TACCGTAATT
AATACGAGCA CCCCCCAGAC TATTGTAAAG GCAGATACGG TAACTCTCTC GGGGTCCGGT
GCCCAGAATG GTTCGATTAC TCTCTGGATT TTCGGGAGCA ATTATTTTGC CACCATGACA
ACGACACCGG ATAAAAAAGG GAATTATACC TTTACGCTCA AGCCGGCAGA TACAAACCGG
TTCTCCCCGG GAAAATATGC TTTCCTGATT CAGGATCCCG GAGCTAACCA GGTGTTTGAG
ATCGGGCCGC TATCCTGGTC TGATGGCAGC ATCCGCATTT CAGACCGCGG AAAAGTTGTA
GAAAATATAG GTTCTCCGGC AACTTTTCCG GCTAATATTG TGCCGGTGGC CGAGACTGTT
CTTAATGCTT CAGACAGACC CGATGTGGAT GATATTTTTA CCCCGTATTA TTTTTACGTG
GAGGAGCCTA CTATCCACTT CAACCGGGAA AATAGTGCCG GAAGCCTGCC CGACCAGACC
ACTGGTGAAG CACTACTCAT CACCGGAACC ACAAACATTG GAACCGAAAA CCAGCTCCAG
GTCAGCGTCC GGAATGCAAC ATCGGGAGAT CTGGTCACCT CACAAACTAT CCCGGTGGTG
GAAGGTGCCA ATACCAACCA GTGGACCTAT TCACTCAACG AACCGGGCCT TCCGCCCGGT
TCATATACGG TGACTGTTGG AGAGCAAAAG TACACAACCA AAGGCAGCGC ATCAGCACAG
CTCATGATCC GGGAATATCT GATTGCTGGC AACTCTTCCT TTATCCCTCA ACCGGAACTT
CCCCCGGGGA CAACACCCTT TGATGTTCTT CTCCCCCTCC TGATCAGCGG TGCTGCTCTT
GCCATTATCG GGATCATTAT GCTCGTATCG TTGCGAAAGT AA
 
Protein sequence
MHRAIVSHDV ILEARMNSTI LAVILLILIV LPVSADLTVI NTSTPQTIVK ADTVTLSGSG 
AQNGSITLWI FGSNYFATMT TTPDKKGNYT FTLKPADTNR FSPGKYAFLI QDPGANQVFE
IGPLSWSDGS IRISDRGKVV ENIGSPATFP ANIVPVAETV LNASDRPDVD DIFTPYYFYV
EEPTIHFNRE NSAGSLPDQT TGEALLITGT TNIGTENQLQ VSVRNATSGD LVTSQTIPVV
EGANTNQWTY SLNEPGLPPG SYTVTVGEQK YTTKGSASAQ LMIREYLIAG NSSFIPQPEL
PPGTTPFDVL LPLLISGAAL AIIGIIMLVS LRK