Gene Mboo_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1948 
Symbol 
ID5412103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2013295 
End bp2014485 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content58% 
IMG OID640869189 
Productphosphotransferase domain-containing protein 
Protein accessionYP_001405106 
Protein GI154151488 
COG category[S] Function unknown 
COG ID[COG1379] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00375] conserved hypothetical protein TIGR00375 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGGG GGCTGAAAAC ACGGGTCCTC CTTATATCCC TGTACGGCGT AATCCGGAAA 
GGTATACTCA TGCTTGCCAC TGCCGACCTG CACATCCATT CGCCGTACTC GATTGCGGTT
TCCCGATTCA TGCAGCCGGA GGCGTTGATC AAAGGGTGCG TGACCAAGGG CATCCAGGTG
CTCGGCACTG GTGACGCACT CCAGCCTGAC TGGCTTGCCG GGTGGGAACC TTTCCTTGAG
AACGATGCTG GCATTATTAT CGTTCCTCAG GCAGAAGTCG AGGACAAAAA GCGTGTCCAC
CACGTAATCC TTGCGCAGGA ACCCGCCCAA TTCGATCAGC TTCGGGAGCT GCTGGCCGGA
ACCACCAAGA GTTTTCTTTC GAGCGGGCGA CCGCACGTAT ACCTGAGTGG GGAGGATATT
GCCCGGCATG CCCACGATGT TGGCGCGCTT ATAGGCCCGG CCCATGCATT TACCCCGTGG
ACGGCAATGT ATGCATACTT CGATAGCGTT CCTGCCTGTT ACGGGGGCGA GCCGATTGAT
TTTGTGGAGC TTGGCCTTTC TGCGGACAGC TCGTACGGGG CTGCCATCCC GGATCTCTAT
AATCTGCCGT TCCTCACCAA CTCTGATGCC CACAGCCCGA CACCGGATAA GCTCGGGCGG
GAGTTCAACC GGTTCAATCT GACCGGCCGT ACCGCAAAAG ACGTGATCGC GATGATACGG
GTCGGGGATG TTGCCATGAA TGCCGGCTTT TTTCCCGAGG AAGGGAAGTA CAACCGGACT
GCCTGCACCC GCTGCTACAC GCAGTACTCC CTTGAGGAGG CGATCGGGCA CAACTGGAAA
TGTCCCGTAG ATGGCGGGCT CATCAAGAAA GGGGTATCTG ACCGGGCAAG GGAACTCTCA
CGGGGAGGAA CCGCCCGACC CCGGCCGCCG TACCTCCATG TGCTGCCGCT TGCCCAGATC
ATCCAGACTG TCGAAGGCGC TTCTTCACCG AATACAAAGA AATGTAAGGA GATTTATGCC
TCGTTTATCG GGACGTTTGA AAACGAGATT GCCCTTCTGG TCGATATTCC CCTTGCCGAG
ATTCAGGCGG TCCACCCCGG TGTCGCGGAA GCAATCTCGG CACTGCGGGA AAACCGGGTT
GTCCTCCATC CCGGTGGCGG GGGGAAGTAC GGAACGTTCT CGCTGAGGTG A
 
Protein sequence
MEGGLKTRVL LISLYGVIRK GILMLATADL HIHSPYSIAV SRFMQPEALI KGCVTKGIQV 
LGTGDALQPD WLAGWEPFLE NDAGIIIVPQ AEVEDKKRVH HVILAQEPAQ FDQLRELLAG
TTKSFLSSGR PHVYLSGEDI ARHAHDVGAL IGPAHAFTPW TAMYAYFDSV PACYGGEPID
FVELGLSADS SYGAAIPDLY NLPFLTNSDA HSPTPDKLGR EFNRFNLTGR TAKDVIAMIR
VGDVAMNAGF FPEEGKYNRT ACTRCYTQYS LEEAIGHNWK CPVDGGLIKK GVSDRARELS
RGGTARPRPP YLHVLPLAQI IQTVEGASSP NTKKCKEIYA SFIGTFENEI ALLVDIPLAE
IQAVHPGVAE AISALRENRV VLHPGGGGKY GTFSLR