Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1944 |
Symbol | |
ID | 5412099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2009042 |
End bp | 2009710 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640869185 |
Product | TrkA domain-containing protein |
Protein accession | YP_001405102 |
Protein GI | 154151484 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.772638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACATCA TCATCGTGGG GCTTGGCGGA ATCGGGCGAA GTCTGGTCAG GCAGGCGGTC GAACACGGCA ACAACGTGGT TGTCATCGAC CAGGACGAGG CCCGGTGCAG CGAAATCCTG GAGCACTACG ATATCCTGGC AATCACCGGT AACGCCACCG ACAAGTCAAC ACTTGAGGAA GCTGGTATCG ATCGGACTGA TGCATTTGTG GCCACCACAA GCGATGATGC CGTCAATCTG ATGACTTGCT GGCTTGCAAA AAGATTTCAT GTCCCAAACG TGGTAGCAAT CGTCAACCAG CCAGCCCATT CGGAATTCTT CAAAGAGGTA GGAGTCCGGA TCAGCGAGAA CCCGGACGAC CTGGTGGCCT CGCGTCTCTA TTACTGGACC GAGAACCCGA AACTCCAGCA GCTGGCCTCC ATTCCCGGCG GATCGATCTT CGAGATCATG GCAGAAGAGA ATGCTCCTAT AGTGGGTCAT GAGATCCGCG AGCTCAAGGT TAAGGACTTT GTCTTTATCG CGATCCGGCG GGCCGGCGGT GCGCTTATTA TCCCTAGCGG CAATGTCCGG ATCCAGCCCG GCGATGTCTT TACGGTTTTT ACCAAAAAAG AGGCAGAGGA AGACTGCCTG CGGCTCCTCA ACAAACAGTT AAAAAAATCA GCGGATTGA
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Protein sequence | MYIIIVGLGG IGRSLVRQAV EHGNNVVVID QDEARCSEIL EHYDILAITG NATDKSTLEE AGIDRTDAFV ATTSDDAVNL MTCWLAKRFH VPNVVAIVNQ PAHSEFFKEV GVRISENPDD LVASRLYYWT ENPKLQQLAS IPGGSIFEIM AEENAPIVGH EIRELKVKDF VFIAIRRAGG ALIIPSGNVR IQPGDVFTVF TKKEAEEDCL RLLNKQLKKS AD
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