Gene Mboo_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1941 
Symbol 
ID5412096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2005863 
End bp2006918 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content58% 
IMG OID640869182 
Product6-phosphofructokinase 
Protein accessionYP_001405099 
Protein GI154151481 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID[TIGR02483] phosphofructokinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.333925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA CAGGAAAAAT CGGCGTGCTG ACTGGTGGCG GAGACTGTCC GGGTCTCAAT 
GCGGCGATCC GTGCGGTGGT GCGCAGCGGA ATTGCACACG GGTATGAGGT AATCGGAATC
CGGAACGGCT GGCAGGGTCT CATTGCCAAC GATATTTTCC CGCTTTCGGA TCATCTGGTT
TCCGGGATTA TCTCGTGGGG AGGAACAATC CTTGGTACGT CCCGTACCGA TCCGGTGAAA
AATCCTGACG ATATCGCAGC CCTCAAACGG GCGCTGGACG AGCAGGGCAT CGGAGCTCTC
GTGGTGATCG GGGGCAACGG AACCCTCAGT GCAGCAAAAG AGGTGGCAGA AAAGGGCGTC
CACCTTGTGG GGATCCCAAA AACCATCGAT AACGATGTCT TTGGGACTGA TGTCACTATC
GGGTTCGATA CTGCAGTAGC AATTGTGACT GAGGCGATCG ACAGGCTCCA CACAACCGCG
GAATCCCATC ACCGGATTAT GATACTGGAA GTGATGGGAC GCCGGTCCGG CCGGCTCGCG
CTCGCGGCCG GGATGGCCGG GGGTGCCGAC CAAATCCTGG TACCGGAGAT CCAGGTACTC
ATGAATGAAG TCTGTTCGTC CCTTGAGGCA CGGTCCCGGG TCGGGAAAAA ATTCTCGATT
GTGGTTGTGG CAGAAGGGAC CCGGCACGAA GATATTGCCG GAACTGTGGT CCCGGCATGT
GACAGGGATG AATGTGGCCA TGAAAAGTTT GTCGGGATTG GCAATTTCCT GGGAAAGGAG
CTGGAGCGGC GTCTGTCCAT CGAGACCCGG GTCACGGTGC TCGGCCATGT GCAGCGCGGG
GGAAGCCCAA CTGCACATGA CCGGATCCTT GCTACACGGC TTGGGATCGC AGCGGTAGAG
CAAATCCACA CGGGCAGTTT TGGCTGCATG GTCGGGATGC AGGAGGGCCG GATCGTCCAG
GTACCTCTGG AGTCCGTAGC TGGCCGGTCC CAGGGAGTCG ATCCCAAGGT ATACGAAGAG
GCAATGAACG TGGCAGGAAT CACGGAGCAC AAGTGA
 
Protein sequence
MAFTGKIGVL TGGGDCPGLN AAIRAVVRSG IAHGYEVIGI RNGWQGLIAN DIFPLSDHLV 
SGIISWGGTI LGTSRTDPVK NPDDIAALKR ALDEQGIGAL VVIGGNGTLS AAKEVAEKGV
HLVGIPKTID NDVFGTDVTI GFDTAVAIVT EAIDRLHTTA ESHHRIMILE VMGRRSGRLA
LAAGMAGGAD QILVPEIQVL MNEVCSSLEA RSRVGKKFSI VVVAEGTRHE DIAGTVVPAC
DRDECGHEKF VGIGNFLGKE LERRLSIETR VTVLGHVQRG GSPTAHDRIL ATRLGIAAVE
QIHTGSFGCM VGMQEGRIVQ VPLESVAGRS QGVDPKVYEE AMNVAGITEH K