| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1938 |
|---|
| Symbol | |
|---|
| ID | 5411023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2003701 |
|---|
| End bp | 2004060 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640869178 |
|---|
| Product | roadblock/LC7 family protein |
|---|
| Protein accession | YP_001405096 |
|---|
| Protein GI | 154151478 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.286319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAG ACAAGATTGC GGCATTTATT GAAAAAATCC GGGCTGTCGA CGGGGTAACC
TCATGCGCCC TCGTATCGCG CGACGGCATT ATTGCCGGGA AATATTTTGA CCGTGATCTC
AACGAACCCT GGTTTGGTGC ACTCGCTGCC ACTATCCTTG CTTCATCAGA ATCTGCGGGG
AACCTCGTTG GCATGAAATC TCTTGGGACA GTCTCTGTAT TGGGGGCTGA CTCATCCATG
CTTATCATGG GTGCCGGTGA TCATTTCCTT ATCGCAGCGC TCCTGAAGGG TGATGCACAA
AAGGAAGAAA CAAGCTCCCA GATCCATGCC GTTGCCGCAG AGATCGGGCA GGTGATGTAA
|
|---|
| Protein sequence | MLKDKIAAFI EKIRAVDGVT SCALVSRDGI IAGKYFDRDL NEPWFGALAA TILASSESAG
NLVGMKSLGT VSVLGADSSM LIMGAGDHFL IAALLKGDAQ KEETSSQIHA VAAEIGQVM
|
|---|
| |