Gene Mboo_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1920 
Symbol 
ID5410118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1983411 
End bp1984061 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID640869158 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_001405078 
Protein GI154151460 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA AATTCCACAC GGAACTCAAA GATCTCAAAA AAGGGGTCTC GGGAATGGCC 
CGCTACGCCT TCTCGATGCT TCAGGACTCG CAGGAGGCAT TCATCAACCA GGACGCCGCG
CTTGCCGCCA CGGTGCTCGA CCGCAAAGAC GCTCTCCGGG AGAAGACCGT GGAACTCGAG
GAGATCTGCT ATCAACTCAT TGCCTTAAAC CAGCCGGTGG CAAAGGACAT GCGGACGATC
GTCTGCTCGT TAAAGATGAT CGCAGCATCG GAACGGATCG GGAGATACGG CAAGTCAACC
GCTAAAATCG TAAAAGAGAT CTCCGGCAAG CCCCATATTG CCAACATGAT GAGCATCCCG
CTCATGTCGG AATACGTGCT TGCAATGATC GACGATGCGA TCACTACCTA CGAAACCGAA
AACGTAAAAA AACTCGAGGG ATTCTCCGCA CGGGACGATG CAATCGACGC TCTGCGCCAC
TCCATCTTCC GTGAGGCTAT CACCTACATG ATGGAAAACC CCAAAACCAT CACCCAGGCC
ACATACTATA TCATCATTGC CCGGTACCTG GAGCGCTGTG CTGACCATGC CTGCAAGATG
GCAGAAAATG TCCAGTACAT GGAAACCGGC GAACGGATCG AAATCAAATG A
 
Protein sequence
MTDKFHTELK DLKKGVSGMA RYAFSMLQDS QEAFINQDAA LAATVLDRKD ALREKTVELE 
EICYQLIALN QPVAKDMRTI VCSLKMIAAS ERIGRYGKST AKIVKEISGK PHIANMMSIP
LMSEYVLAMI DDAITTYETE NVKKLEGFSA RDDAIDALRH SIFREAITYM MENPKTITQA
TYYIIIARYL ERCADHACKM AENVQYMETG ERIEIK