Gene Mboo_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1916 
Symbol 
ID5410114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1978818 
End bp1979189 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content53% 
IMG OID640869154 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001405074 
Protein GI154151456 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.58602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCCCC TTAAATTCCA TGAGGGCGGA TTGATCCCCG TCATAGTCCA GGATCAAAAG 
ACCCGGGAAG TCCTGATGAT GGCCTATGCA AACGAGGAGG CAGTACGGCT TACCGAGAGT
ACCGGTTCTG CCCATTATTA CAGCCGGAGC CGGAAAAAAA TCTGGAAGAA GGGAGAAGAG
AGCGGCCATT TCCAGAAAGT AGGACGTATT CTCGTGGATT GCGACGAGGA TTGCCTCATA
TACGAAGTCG AGCAGACCGG TGCGGCCTGC CATACCGGCT ATCGCACCTG CTTTTACCGG
ACCCTCGACG GCGTCACCAT TGGTGAAAAA ATATTTGACC CAGAAAAAGT GTACGGGAAA
ACCGGGCATT AG
 
Protein sequence
MLPLKFHEGG LIPVIVQDQK TREVLMMAYA NEEAVRLTES TGSAHYYSRS RKKIWKKGEE 
SGHFQKVGRI LVDCDEDCLI YEVEQTGAAC HTGYRTCFYR TLDGVTIGEK IFDPEKVYGK
TGH