Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1906 |
Symbol | |
ID | 5410863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1968368 |
End bp | 1970617 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640869144 |
Product | type II secretion system protein E |
Protein accession | YP_001405064 |
Protein GI | 154151446 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.124978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.483962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCG GTACCCCTCC TCAAGAGGTA GTTCCGGAAT CCCTCCCCAC CCCGGATGAG CCCGTACAAT TCCCGAAAGA AGCAACCGGT AAACCTGAAG AGCTGGATAC TTTCGATGAG CTTCTCGAAG ATGTCCCCCC GGCGCAAGAA GGTGTAGAAC CCCCGGTACT AAGCGGGGAC GATGTTCGCG CGGCACTGGG CAAGATCATG GGACAACCGG AGATGGTCCC CCCGTCGGCG CACTCCCCGG AGCCTCTTAC AGCCTCCCCG GAATCAGAGT TACCCCCGGA ACAAGTTGTC GAAATTACTG AAGAGGAAGA TCCCCGCGAG AATCGCACGT CCCGGTTTTT CAAGAAAAAG AAGGCCGAAA AAGTGGGAGC CCCGACAGAT CAGATCGGGA AATCCGCGGT GACCGAATCT GATGAGCGGA TTATTTCCGC TGACCAGATA TCCGAATTTT CCGGTCTTAT TCTCCCCAAA GGTGCGACAT TCCATGTTGA TGAGATCAAT CTTCATGGCC GGATGCAGGC GTTTGAGTCC ACCGGAACCG GTAGCCTTCC CCCGGAACTT GCCGAGATCT GGAAAAGGGA GTTTTCCACA TCCGGTTTCA AGGACCTTGA ATCAGAACTG ACCCTTGCAG ACAAGGGGAC GGATAAGGGG ACAGAAAAGA AATCCTGGTT TAGTGCACTC TTCAGCGCGA TCCGGTCGGA GAACGTGGAA TACGATCCCA AGATCCATGG ACCTCTCGTC GATCTCACCT TTGAGCCAAA ACCCGGTATC GAAGTGATGG ATACGTACCC CGTCAACGAT CCCTATGCAT ATGTCCGGGT CATCTATGAC CATTCCACCC ATGAATATAC CTACCAGGTT CTCGAACCTG TACTCTCGGA GCCAGAGAAA GACCTGTTAA AGGAGTTAAA GGAACGCCTT TTTGAGATCC TTGACATCAA CACCAAGGAC ATTTCCAAAG AGGAGGCCCG CAGCCAGCTC CGTCGTTCGG TTGATGAGAT TCTGGCGGAT TACGGAATCA AGCTCAACCC GGTGGAACGT GAGAAGATCC TCTATAACAT GCACAAGGAC TTTCTGGGTG ATGGCATGAT CGATGCGATC ATGCATGACA AGTATATCGA GGATATCTCC TGCGACGGGG TCAACACCCC TCTCTTTGCC TTCCATGCCA ATTACGAGTC AATGAAGACC ACCCTGATGT ACCACAATGC CGAGGAGCTC GACTCCTTTG TCACCAAGCT CGCACAAAGG GCAGGCAAGT ACATCTCCAT TGCCGAGCCC ATTCTCGATG CGACCATGCA GGATGGATCC CGTATCCAGA TGACACTGGG GCAGGAGGTC ACTGCGCACG GCTCGACATT CACTATCCGT AAGTTCAAGG ACGAGCCAAT TACCCCTACC GATCTCATTG AATGGCACAC CTTTGCCCCG CTCTCGATCG CTTACATATG GCTCTGCGTC GAGAATGGCA AGTCCGCTAT CTTTGCCGGT GGGACCGCGT CCGGGAAGAC TACTGCCCTC AATGCAATCT CGCTTTTCAT TCCCCCGATG GCAAAGATTG TCTCTCTGGA GGATACCCGT GAAGTCAAGC TTCCTCACCC GAACTGGATC CCGAGTGTCA CGCGTGACTC ATTTGACACC GCCGGCAGAG GAGAGATCAA CATGTATGAG TTGCTCCGTG CGGCTATGCG TCAGCGGCCC GAGTACATCA TCGTCGGTGA GGTTAGAGGT AAGGAATGCC AGACACTTTT CCAGGCAATG AGCACGGGCC ACGTTACCTA CTCCACAACT CACGCCGACT CTGTTGCGAG CGTCGTGCAC CGTATCGAGA ACCCGCCCAT GGACGTACCA CGGAATATGC TCTCCGCGCT CGATTTCATC TGTGTCCAGG TACAGGCCCG GATGGGCGGG AAACGGATCC GCCGGAACAA GCAGATTGTT GAGATCCTCG ATATCGATCC GCGGACAAAC GAACTGATCA CAAACGAGGT CTTCCGCTGG CGATCGGCAA CCGATGAGAT CACCTACTCG GGGAAATCTT ACATCCTTGA GGACATCATG GAGGCGCGGG GCTGGAACGA GAACCGTATG CGGGAAGAAC TCAAACGCAG GCAGGAGGTG CTGGAGTGGA TGCGTATCAA GAAGATCCGG CACTACAAGG ATGTAGCAAA GATCCTTATC TCGTACTTCC GTGAGCCCGA AGTGGTTGTA GAGCGCGTAA GGAAGGATCT ATATGAATAG
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Protein sequence | MNAGTPPQEV VPESLPTPDE PVQFPKEATG KPEELDTFDE LLEDVPPAQE GVEPPVLSGD DVRAALGKIM GQPEMVPPSA HSPEPLTASP ESELPPEQVV EITEEEDPRE NRTSRFFKKK KAEKVGAPTD QIGKSAVTES DERIISADQI SEFSGLILPK GATFHVDEIN LHGRMQAFES TGTGSLPPEL AEIWKREFST SGFKDLESEL TLADKGTDKG TEKKSWFSAL FSAIRSENVE YDPKIHGPLV DLTFEPKPGI EVMDTYPVND PYAYVRVIYD HSTHEYTYQV LEPVLSEPEK DLLKELKERL FEILDINTKD ISKEEARSQL RRSVDEILAD YGIKLNPVER EKILYNMHKD FLGDGMIDAI MHDKYIEDIS CDGVNTPLFA FHANYESMKT TLMYHNAEEL DSFVTKLAQR AGKYISIAEP ILDATMQDGS RIQMTLGQEV TAHGSTFTIR KFKDEPITPT DLIEWHTFAP LSIAYIWLCV ENGKSAIFAG GTASGKTTAL NAISLFIPPM AKIVSLEDTR EVKLPHPNWI PSVTRDSFDT AGRGEINMYE LLRAAMRQRP EYIIVGEVRG KECQTLFQAM STGHVTYSTT HADSVASVVH RIENPPMDVP RNMLSALDFI CVQVQARMGG KRIRRNKQIV EILDIDPRTN ELITNEVFRW RSATDEITYS GKSYILEDIM EARGWNENRM REELKRRQEV LEWMRIKKIR HYKDVAKILI SYFREPEVVV ERVRKDLYE
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