Gene Mboo_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1902 
Symbol 
ID5410859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1965941 
End bp1966246 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content49% 
IMG OID640869140 
Producttranslation initiation factor Sui1 
Protein accessionYP_001405060 
Protein GI154151442 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.445863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGTG GCATTTGCCC GACGTGTGGA CTTCCCAAGG AACTATGTAT CTGCGAGGAG 
GTAGCAAAGG AACAGCAGAG GATCAACGTC AAAGTCAACA AACGCCGGTA CGGGAAAGAG
GTCACAGTAA TCGAAGGTCT TGACCCTACG GATATTGACC TTGAGGATCT CTCAAAATTT
ATGAAGGGCA AGCTTGCGTG CGGCGGAACG GTCAAGGGAA ATTCGATCGA ACTGCAGGGT
AATCATCGCG ACCGTGTCAA GGAACTTCTC TCGCTCAAAG GCTACAGCAC GGAAAACATC
TCTTAA
 
Protein sequence
MIGGICPTCG LPKELCICEE VAKEQQRINV KVNKRRYGKE VTVIEGLDPT DIDLEDLSKF 
MKGKLACGGT VKGNSIELQG NHRDRVKELL SLKGYSTENI S