| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1899 |
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| Symbol | |
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| ID | 5410741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1962853 |
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| End bp | 1964016 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640869137 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001405057 |
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| Protein GI | 154151439 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.399282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGGG GCGAAGGTAC ACGCCTGCGC CCTCTCACCT TCGAACGGCC AAAACCCTGT
ATTCCGATCG TCAACCGACC GTCAATCCAG CACCTGGTTT CCCATCTCTC CAACCTTGGG
TTCCGCGAAG TGGTGATGAC CCTTGGATAC ATGGGAAAAG ACATCGAGGC TGCGCTAGGT
GATGGGTCAC TCTATGGCGT TGATATCACG TATGTCCATG AGAAAACCAA GCTCGGGACA
GCCGGCAGCG TGCGCAATGC CAAAAAATAT CTTGACGATC AGGACTTCCT TGTGGTCGGC
GGCGATCATG TTACCGATCT TAATGTCCTT GAATTCTACC GGACCCACCA GAAGGAGAAG
GCCGTTACTA CAATCGGCCT GATCTCGATC GATGATCCCG GGGAGTATGG TATCGCTGAG
ATCGATGTGA GTTATGAGAT AAAACGGTTC AAGGAGAAGC CTTCCCCCGG AGAGATCTTC
TCCAATCTCG CAAGCACCGG GATGTACGTC TGCAGTCCTG AGATCTTCGA TTATATTCCG
TCCGGGAAAA AATCCGACTT TGCCCGGGAC ATTTTCCCGC GCCTGATGGA GGAAGGAAAA
TCCCTCAAGG GCTGGCTTGC CCGCGGGAAC TGGACCGATG TGGGCAGCCC GCACATGCTC
CGCCAGGCCG AGCGCTGGAA ACTCCAGGAG ATCACCACCA CCGATATCAT CGGCGATCTT
TCCATGCACG GAGCCCGGAT CCAGGGACCG GTGAATCTTG GGGATTCGAT AACCCTTGGG
AAGAACACCC GGGTGATCGG GCCGGTATCG ATTGGATCGG GCACCACCAT CGGAAACAAC
GTGCTGATCG GTCCCTATAC GAGTATCGGC GAGCGCTGCA TTATCCGGAA CAACGCGAAG
ATCTTCTCGT CTTCGCTCTA CAACCGGGTA ACAATCGGAT CAAACAGCAC GATCTCAGGA
AGCATCATTG ATAACGACAC CCATATAGGT GAGGGCTGCA GTATTGAGAA CGATACCGTT
CTTGGCCCCC GGGTGGTGCT GCGCAACAAC GTGGTGGTCC ATTCCAAGAC CCGAATCTGG
CCTGAGATCG TGGTCTGCGA TAATCAGATC ATAAAAGAGC ACGTGCTCAA CGACAAGTTC
GACCTCCGGT GCGAGGGATC GTAA
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| Protein sequence | MCGGEGTRLR PLTFERPKPC IPIVNRPSIQ HLVSHLSNLG FREVVMTLGY MGKDIEAALG
DGSLYGVDIT YVHEKTKLGT AGSVRNAKKY LDDQDFLVVG GDHVTDLNVL EFYRTHQKEK
AVTTIGLISI DDPGEYGIAE IDVSYEIKRF KEKPSPGEIF SNLASTGMYV CSPEIFDYIP
SGKKSDFARD IFPRLMEEGK SLKGWLARGN WTDVGSPHML RQAERWKLQE ITTTDIIGDL
SMHGARIQGP VNLGDSITLG KNTRVIGPVS IGSGTTIGNN VLIGPYTSIG ERCIIRNNAK
IFSSSLYNRV TIGSNSTISG SIIDNDTHIG EGCSIENDTV LGPRVVLRNN VVVHSKTRIW
PEIVVCDNQI IKEHVLNDKF DLRCEGS
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