Gene Mboo_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1896 
Symbol 
ID5410738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1960165 
End bp1960740 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content58% 
IMG OID640869134 
Producthypothetical protein 
Protein accessionYP_001405054 
Protein GI154151436 
COG category[R] General function prediction only 
COG ID[COG1326] Uncharacterized archaeal Zn-finger protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.473881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATCA CCGTTCCGTG CCCTGAATGC AAGGAAGAGA CCGAGCACGA GATCCTCTCC 
GAATCCCGCG ACCGGCTCGT CCGGTGCACT GCATGCGGGC ACCACCACCA TATCCCCAGG
GAAAAAGAGG TAAAACCACT TGTGGTAAAG ACGATCATCT CCCGTGAGGG GACCTCGATT
GCCGGGACCA TTGAGTTTGA CCCCGAGGAC GAATGCTCCG TGGACGACCA TCTGGTTGCC
GAGGCCGGGG ATGAAGCCTA TGGGGTCGAG ATCACGGCAG TCGAGTGCGG AGAAAAGCGG
CCGCAGCGGG CGAAGGTAAA GGATATCACC ACATTGTGGA CCCGGACCAT CGACCGGGTA
GTGGTGAAGA TCTCCATCCA CGACGGCAGG AAGACCATTC CACTCTACCT AGAATGCGAA
GGCGAGGACG AGTTCGTGGT AGGCCAGAAA TACGTGGTGG ACGGAAAGCG TTTCACCCTC
TCCCACATCA AGCTGCGCGA TGGCCCCCTG ATGCGAAAGC CGGACTGGAA GACCTTTGCC
CGCCGGATCA AGAGGGTCTA CGGCGTCAGG TCATAA
 
Protein sequence
MFITVPCPEC KEETEHEILS ESRDRLVRCT ACGHHHHIPR EKEVKPLVVK TIISREGTSI 
AGTIEFDPED ECSVDDHLVA EAGDEAYGVE ITAVECGEKR PQRAKVKDIT TLWTRTIDRV
VVKISIHDGR KTIPLYLECE GEDEFVVGQK YVVDGKRFTL SHIKLRDGPL MRKPDWKTFA
RRIKRVYGVR S