| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1877 |
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| Symbol | |
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| ID | 5411371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1946605 |
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| End bp | 1947930 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869115 |
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| Product | signal recognition particle protein Srp54 |
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| Protein accession | YP_001405035 |
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| Protein GI | 154151417 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.189511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA GCCTTTCAGG CTCGCTCAAG GACGCCTTAA AAAAGCTGGC AGGAAAAGCA
GTAGTTGACC GAGCGGCGGT TGACGAGCTG GTAAAAAATC TCCAGCGGGC GCTCCTCTCC
GCCGATGTTA ACGTCAAGTT GGTCATGGAT CTTTCAAAAG CGATCCGTAC CCGGTCGCTT
GATGAAGAGC TGCCCAAAAA TACCAATGTC CGCGAGCATG TCCTGCGGAT TGTGTACCAG
GAACTGGTAC GGCTCGTCTA CGCCAGCGCC GACTTAAAAC TAGAACCGCA GGTCATTCTC
ATGGCCGGTC TCCAGGGGAG CGGCAAGACC ACGACCACGG CAAAGATCGC CCGCTACTTC
CAGAAGAAGG GCATGAAGGT CGGGGTGATC TGCGCCGATA CCTTCCGGCC CGGGGCGTAC
GACCAGCTCT CCACGCTCTG TGCGAAGATC AACGTGCCCT GCTTTGGCAA CCCGAAGGTT
ACCGATGCCC GGCAGATTGT CCGGGAGGGT CTTGTTGCGG TTAAGGACCA GGAAGTCATC
ATCGTTGATA CCCAGGGCAG GCACGCTCTG GAGCCCGACC TGATCCAGGA GATTATCGAT
CTCAATGCAC TCACGAAAGC ATCCCACCGC TGGCTCGTGA TCGATGCCGC ACTTGGCCAG
CAGGCAAGCG AGCAGGCAAA ACGGTTCCAC GAAGCGATCG GGATCGATGG CGTGATCATC
ACCAAGATGG ACGGCACGGC AAAAGGCGGT GGCGCCCTTT CGGCAGTTGC CGAGACAAAG
AGCGGGATTG TCTTTATCGG TGCCGGGGAG ACGATCGAAG ATCTCGAACG CTTCGATGCA
AACGGGTTTA TCTCCCGTCT CCTCGGTATG GGGGATCTCC AGGCCCTTGT CGAGAAGGTC
CAGGAAGCCC AGATGGCTGA CGAGGTGGAC ATGGAAGCGA TGATGAAGGG CCACTTCACC
CTTCGCGACA TGTACAAGCA GCTCGAAGCC CTCAACAAAA TGGGGCCCTT AAAGCAGATC
ATGAGCATGC TCCCGATGGG AAACATGCAG CTCCCCGAGG GGGTCTACGA TGTCACCAGC
ACCAAGATGG CGCGGTACCG GATCCTTATG GACTCGATGA GCCCAAAGGA ACTCGACGAT
CCTTCCCTCA TCAACAGCTC CCGGATGCAG CGGATCGCCC GGGGTGCCGG GGGTACTCCC
GAAGAGGTAC GGGAACTCCT GAAATATTAC AAGATGATGC ACAAGACCCT CAAGGGCCTG
CGGGGTTCCG GTGGCGGGAA ATTCAACATG CAGCGCTTGA TGAAGCGTTT CTCCGGAATG
CAGTGA
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| Protein sequence | MMDSLSGSLK DALKKLAGKA VVDRAAVDEL VKNLQRALLS ADVNVKLVMD LSKAIRTRSL
DEELPKNTNV REHVLRIVYQ ELVRLVYASA DLKLEPQVIL MAGLQGSGKT TTTAKIARYF
QKKGMKVGVI CADTFRPGAY DQLSTLCAKI NVPCFGNPKV TDARQIVREG LVAVKDQEVI
IVDTQGRHAL EPDLIQEIID LNALTKASHR WLVIDAALGQ QASEQAKRFH EAIGIDGVII
TKMDGTAKGG GALSAVAETK SGIVFIGAGE TIEDLERFDA NGFISRLLGM GDLQALVEKV
QEAQMADEVD MEAMMKGHFT LRDMYKQLEA LNKMGPLKQI MSMLPMGNMQ LPEGVYDVTS
TKMARYRILM DSMSPKELDD PSLINSSRMQ RIARGAGGTP EEVRELLKYY KMMHKTLKGL
RGSGGGKFNM QRLMKRFSGM Q
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