Gene Mboo_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1876 
Symbol 
ID5411370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1946028 
End bp1946603 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content60% 
IMG OID640869114 
Producthypothetical protein 
Protein accessionYP_001405034 
Protein GI154151416 
COG category[S] Function unknown 
COG ID[COG1901] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.205093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGT TTGCCATTGT CGGGCACCGT GCCCGCACGG ACGGTGAATT CTCCTTAAAC 
GACCTGCCTG GTGCCGGGCG CATGGATGTG CTCTGCCGGT GCGTAAATGC GTCGCTCTTC
CTCTCGCATG ACCTGCGCAG GGATGTGGAG TGCGGCCTTG TGCTGCTTGG CGAGCCCAAA
CCCCCCAAAA CGGTGCTCTT CAAGGGTAGT GAGATCCGGT CCCTGTCTCC TGATGAACGG
AGCGCGGGGG CGCTTATCAA AAAGGCGCTC TCAATCCCGT GCGGGAGCGA GTTCCGCGAG
GCAGCACCCG GGGTCTTTGT GCGAAACGGA GGCCTTGAAC GCCTCCTTGC AGAACAGGCA
TTTGCCGTAC TGGACGAGAA GGGTACCGAT ATCCGCACGG CCAAGGAAGT GCCGGGGGCG
TTTCTCCTGT CAGACCACCA GAATTTCACG GAAGAAGAAG AGGCACTCAT CCGGGATGCC
CCCCGGTACT CGGTGGGGCC TGCCTGCCTG CACGCCGATC ACACGATTAC GGTGATCTCA
AACGAGATCG ACCGGAGGAC AAACGGATGG AGATAA
 
Protein sequence
MTVFAIVGHR ARTDGEFSLN DLPGAGRMDV LCRCVNASLF LSHDLRRDVE CGLVLLGEPK 
PPKTVLFKGS EIRSLSPDER SAGALIKKAL SIPCGSEFRE AAPGVFVRNG GLERLLAEQA
FAVLDEKGTD IRTAKEVPGA FLLSDHQNFT EEEEALIRDA PRYSVGPACL HADHTITVIS
NEIDRRTNGW R