Gene Mboo_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1874 
Symbol 
ID5410343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1944514 
End bp1944804 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content55% 
IMG OID640869112 
Product50S ribosomal protein L21e 
Protein accessionYP_001405032 
Protein GI154151414 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.327207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACC ACAACGGACC CAGAAAGAAA ACACGGTATA AGTTCAAGAA AGAGTTAAGA 
CAGCGCGGGC TGCCGCCGGT CACCTCCGTG ATCCAGCAGT TCGAAGTGGG CGAGAAGGTT
CACATTGTCG TGAATTCAAG CGTCCAGAAG GGTATGCCGC ACCGCCGGTT CCACGGGCTC
ACGGGCACCG TGATCGGTAA GAGGGGCCGG GCCTGGATGC TCACAATCCA CGACGGTAAT
GCGGAAAAAA CGGTCATTGC AAGACCGCAA CATCTAAAAG CACAAAAGTA A
 
Protein sequence
MAHHNGPRKK TRYKFKKELR QRGLPPVTSV IQQFEVGEKV HIVVNSSVQK GMPHRRFHGL 
TGTVIGKRGR AWMLTIHDGN AEKTVIARPQ HLKAQK