Gene Mboo_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1862 
Symbol 
ID5410331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1937630 
End bp1938103 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID640869100 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_001405020 
Protein GI154151402 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.715493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA TTTCCACCCT GCTTGCCGGT CTTGGTTCCA CTACGGTAAA GATCCGGCGC 
ACGGCCGCTG CGGCCCTTGG CCGGTCCGGC AACCCGGAGG CAGTCATGCC GCTTGTGCAG
GCGCTTTCTG ATCCCCATCC TGCCATCCGG ATCGAGGCCA CGCTTGCACT GGGAAGGCTG
GACGACGCAC GGGCTGTCCC GGGGCTTGTG GTTGCACTCT CCGACACCGA TCCCAGGGTC
AGGGCAGGGG TGGTTGCTGC CCTTGGGCGG CTTAAGGACA AAAGCGCAGT GATCCCCCTT
ACCGCGTGCC TCTCGGACCG CGACGATCGG ATCCGGGCCG GGGCTGCAGA AGTACTGGGA
AAACTCGGGG ACCGGCGGGC TGCTACGGCG CTTGCCGCGG CCATGCACGA TCCCTTCGAA
GAGGTCAGGG AAGCGGCAGG ACGGGCGATT GGCCGGCTGC AAAAGAACAG GTGA
 
Protein sequence
MADISTLLAG LGSTTVKIRR TAAAALGRSG NPEAVMPLVQ ALSDPHPAIR IEATLALGRL 
DDARAVPGLV VALSDTDPRV RAGVVAALGR LKDKSAVIPL TACLSDRDDR IRAGAAEVLG
KLGDRRAATA LAAAMHDPFE EVREAAGRAI GRLQKNR