Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1852 |
Symbol | |
ID | 5410445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1930102 |
End bp | 1931058 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640869090 |
Product | TPR repeat-containing protein |
Protein accession | YP_001405010 |
Protein GI | 154151392 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.776683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCGGTG TCCCGTTCCT GCTTCCTGTC ACAATCCCTA TATCCGATCA GGTTGCCCTT ATCATCATGG AAGATGCAGA GAGCCTGTTT GCTGAAGGTG TGGCCCTGTA CGGGAAGGGG GATTTTCGCC GCGCGATTGC CGCCTTCGAT AAGGCCCTCG TCCTTGACCC GAAGCTGACG GAGGGGTGGA ACAACCGGGG GCTTGCCCAG ATCCAGACCG GGGATTATTC AGGGGCACTC CAGTCCATCA ACCATGCCCT GGCCCTGGAT CCCGGTCACG CGAATGCAAA GAAGGCAAAG AAGGTGGTCC AGGGCCTTAT CAGCGAGTCG GGAGGCACCC TTCCTCCTGA ATCCTCCGGC CCTCTCGCAC CTGATAGCGC GGCAACACGC GGCCAGATGC GCCCCTTTAT CCTGATCATT GCGGTGGCGG TGATCGCGGT CGCGGGTACT ATCGGAGTCC TTGCGATCCT CCATCCCGGT GGTGCGGCGG CCATTCTCCC GATTGCGACT CCCACCCCGG TCCCGACCCC GATTCCTGTC CTAACTCCGA CCCCGACACC CCTCCCGACC GCTACCCCGG TGCCGACGCC AACCCCGACC CGTATCCCGC AGACCGGGGT CTGGGTGGAG GTCAGCTACG ACCAGCTCTT CTCGGGGAAC GTGGGTACGC CCGGCAACCT GCAGCAGCTG GCCGGCAGCC TGCAGGCGCA TCCGAACACC GGGGACCAGT TCTACCAGAT CCCAAGGACG AACAGTGGGT ACATCACGGC CTCGGTGAAC AAGAACGATG GCTCCGGGGA TAACCTGACG GTGAGCATCT ATTCCGACGG TACGCTCGTC CAGACTGCGT CCACCACCCA GCCCTACGGC GCGCTGGATG TCGTGGCAAT CATACCGGCT TCAACCCCGG CCCTGTCATC GGACAACAGC ACGACAAACG CTACAACCAC TGCATAA
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Protein sequence | MAGVPFLLPV TIPISDQVAL IIMEDAESLF AEGVALYGKG DFRRAIAAFD KALVLDPKLT EGWNNRGLAQ IQTGDYSGAL QSINHALALD PGHANAKKAK KVVQGLISES GGTLPPESSG PLAPDSAATR GQMRPFILII AVAVIAVAGT IGVLAILHPG GAAAILPIAT PTPVPTPIPV LTPTPTPLPT ATPVPTPTPT RIPQTGVWVE VSYDQLFSGN VGTPGNLQQL AGSLQAHPNT GDQFYQIPRT NSGYITASVN KNDGSGDNLT VSIYSDGTLV QTASTTQPYG ALDVVAIIPA STPALSSDNS TTNATTTA
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