Gene Mboo_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1841 
Symbol 
ID5411842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1920473 
End bp1921186 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID640869077 
Producthypothetical protein 
Protein accessionYP_001404999 
Protein GI154151381 
COG category[S] Function unknown 
COG ID[COG1852] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.242761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.999986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTT TTGATATCGA CCTTACCCCC TGGCACAGCC TCATGTACAT CATCGGGGAG 
ATTACGGTTC TCTTTATCCT TGGGGCCCTT CTGGTATCGT TCATCCTTGT GGTCATCTCC
CTGTACTCGA TACGGCGGGG GCACCTCTAC TTCCCCACGT TCATCAAAGC GGGGATCGTG
TTCCTGGAAG GCTTTATGAA AGCATTCTTC CGGCTCCTGG GCCTTGAGGA CCGGGAGATG
CTTACCTTCT TTATCAAGAT CCACAACACG ATGAACACGA GCGCATTCTC GAAGATCCCG
CTTGCAGAGC GGGCGATCTT CTTCCCCCAG TGCCTGCGGT CCGCAAAGTG CCCGGCCCAC
CTTACCCCGG AAGGGCTCAA GTGCGTGAAC TGCGGGGAGT GTACCGTGGG GGAGGCCAGG
GCCCGGCTCG AACAGATGGG ATACCGGGTC TTTATCATCC CGGGCTCGTC CTTTATCAAG
AGAATGGTGA AAAAATATCA TCCCCGGGCG ATCATCGGGG TTGGCTGCCT GACTGAGGTA
AAAGAAGGGA TCGACATGGC CGACAAGATC GGTCTTGTTG CCATGGGCGT GGTAACCATA
AAAGAAGGGT GCGTGGAGAC ACTCGTGAAC TGGCAGGATA TCTATGACGT GGCAATCCTC
GGGCTCGACC CAAAGGCCTC AGTTCCCGAG GACCTTCATG CTCTTGCCGG TTAA
 
Protein sequence
MSLFDIDLTP WHSLMYIIGE ITVLFILGAL LVSFILVVIS LYSIRRGHLY FPTFIKAGIV 
FLEGFMKAFF RLLGLEDREM LTFFIKIHNT MNTSAFSKIP LAERAIFFPQ CLRSAKCPAH
LTPEGLKCVN CGECTVGEAR ARLEQMGYRV FIIPGSSFIK RMVKKYHPRA IIGVGCLTEV
KEGIDMADKI GLVAMGVVTI KEGCVETLVN WQDIYDVAIL GLDPKASVPE DLHALAG