Gene Mboo_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1836 
Symbol 
ID5410648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1916577 
End bp1917074 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID640869072 
Productaspartate carbamoyltransferase regulatory subunit 
Protein accessionYP_001404994 
Protein GI154151376 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1781] Aspartate carbamoyltransferase, regulatory subunit 
TIGRFAM ID[TIGR00240] aspartate carbamoyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.228853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCATA TCGCAGCAGC AGATACCGGG GATGACGAAG GCGAAGGCCT TCTTGTGCGG 
CGGATCAAAA ACGGGACCGT GATCGACCAT ATCGACGGGG GCGAAGCACT CAATGTCATA
CGGATCCTCG GGATCTCGGG GACCACAAAT GAGGCACTCT CGATTGCCAC CAATGTTCCC
AGTAAGCACA TGGGGAGTAC CAAGGATATC GTCAAGATCT CCAACCGTGA GCTCTCCAAG
GAAGAGGTGG ACCGGATTGC ACTCATCTCC CCAAATGCAA CAATCAACAT CATCCGGCAC
TTCAAGGTCT GCGAGAAGCA GGGCGTCGAG ATCCCCACCG TGATCGAAGG GAGCGTGCGG
TGCCCGAACC CCGGCTGTAT TACCCGCACA AACGAGCCGA TCCGGACCCG GTTTGCGGTG
CTGCCGGACG GGAAAGGCCT GCGCTGCCTT TACTGCGACT CGGTGATCAC AAAAGACCTG
ACCAGTTACA TCATCTGA
 
Protein sequence
MRHIAAADTG DDEGEGLLVR RIKNGTVIDH IDGGEALNVI RILGISGTTN EALSIATNVP 
SKHMGSTKDI VKISNRELSK EEVDRIALIS PNATINIIRH FKVCEKQGVE IPTVIEGSVR
CPNPGCITRT NEPIRTRFAV LPDGKGLRCL YCDSVITKDL TSYII