Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1828 |
Symbol | |
ID | 5411044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1908372 |
End bp | 1909772 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640869065 |
Product | phosphoesterase domain-containing protein |
Protein accession | YP_001404987 |
Protein GI | 154151369 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.901941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTTTT CCGATGAGGT GAAGGCTGCA TCCGAACAGA TTGCGGCCGC ACACGAAATT ACCATCATCT CCCACATCGA TGCCGACGGC ATCTCCTGTG AAGCTATTCT TTCGCAGGCA ATAGCAAGGC AGGGTATTCC GGTCCGCTCC GTTTTTGTCC GGCAGCTTGA ACCGCTCACC ATGCCCCAGG TGCCTGACGA TTCCTCGTTT AAGATCTTCA CGGATCTTGG CGCCGGCCAG CAGAACCTCC TTGCAGCAAA GGGACTTAAG GAAAAGGACG TCCTGATTGT GGATCATCAC GTCAGCCAGC CCGGTGAGAT TACGTACCCG CAGGTCAACT GCCTCCCCTA CGGGTACACA AAGATGAGCG CTGCTGGTGT CTCGTATCTT ATTGCAAAGG CACTGGACGA AGCAAACATC GACCTTGCAA AACTTGCGGT GATAGGAAAC GTCGGAGACA TGATGGCGCG GGAAACCTGC GGCCTTGTCG GCCCGGTCCG CGAACAGATC GTGGAGGATG GTGTCCGGCA CCGCTCGGTG AAGGTCTGCA AAAAAGACCT CAACTGTTAT GGAACAGCCA CGCGGCCGGT CCACCTCTCG CTTGCCTACA ATGACGACCC GTTCATTAAA GGAATCAGTA ACAACCCTGA CGGCGCAAAA CAGTTCTTAA AGAAACTCGG GATCGTCCAG CAGACATCTG ACGGACGCTG GTACGTATGG GAAGAACTCT CCGATGATGA CCGGCGCCAG ATCATCTCCG CGCTTGCCCA GCAGTTGATC GCAAACGGCG AGAGCGTGGA CCGGCTCCTG GCGGAGACCT ACCGGTTCCC GGATGAGATC CCCAGAACCC CGCTCCGGAA TGCGCAGGAG TACGCAACGG TCCTCAACGC CTGCGGCCGG TGGACAAAAC CCGCGGTAGG GAGTGCCATC TTAAAAGGTG ACCGGGGGCA GGCCTACCGG GAAGCGGAGC ACATGCTGGG GAACCACCGT GCGATTATCC GGGACCTCCT CCAGTACATC ATTGAGACCG GTGTGACCGA GCTTGAACAC GTCCAGTACA TCGATGTCGG GGGGAAGTAC CCGGACACCA TCGTTGGGAT CGGGGCAGGA ATGGCACTTT CCAAGCTGAA CGCGAACAAA CCCATCCTGA TCCTGTGCGA GGTGCCGGAG GACAAGAACC TCTTGAAAGT CTCGATGAGG ACAAACGAAC GGGTGATAGC CCGGGGCGTC GACCTCCAGC AGGCAGTAAG CGAAGCCTCG TCAGAATACG GAGGCAGCGG CGGGGGTCAC AAGATCGCCG CCGGAGCATT TATCCCGAAA ACCGCAGAAC AGGAGTTTGT CAACCGTGTC AACAGGATAC TCGGAGAACA GTTCGCTCGC ACGGGTGCAG GCAATCGCTG A
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Protein sequence | MGFSDEVKAA SEQIAAAHEI TIISHIDADG ISCEAILSQA IARQGIPVRS VFVRQLEPLT MPQVPDDSSF KIFTDLGAGQ QNLLAAKGLK EKDVLIVDHH VSQPGEITYP QVNCLPYGYT KMSAAGVSYL IAKALDEANI DLAKLAVIGN VGDMMARETC GLVGPVREQI VEDGVRHRSV KVCKKDLNCY GTATRPVHLS LAYNDDPFIK GISNNPDGAK QFLKKLGIVQ QTSDGRWYVW EELSDDDRRQ IISALAQQLI ANGESVDRLL AETYRFPDEI PRTPLRNAQE YATVLNACGR WTKPAVGSAI LKGDRGQAYR EAEHMLGNHR AIIRDLLQYI IETGVTELEH VQYIDVGGKY PDTIVGIGAG MALSKLNANK PILILCEVPE DKNLLKVSMR TNERVIARGV DLQQAVSEAS SEYGGSGGGH KIAAGAFIPK TAEQEFVNRV NRILGEQFAR TGAGNR
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