Gene Mboo_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1817 
Symbol 
ID5411451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1901579 
End bp1901968 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content56% 
IMG OID640869054 
Productprefoldin, beta subunit 
Protein accessionYP_001404976 
Protein GI154151358 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1382] Prefoldin, chaperonin cofactor 
TIGRFAM ID[TIGR02338] prefoldin, beta subunit, archaeal 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.674305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAG ATACGGAAGA TTCAATCATG CAGAACATAT CCCCCAAGGT CCAGAACCAG 
TTTGCGATGC TCCAGCAGGT CCAGCAGCAG CTCCAGACCG TTCTCTCTCA AAAAGCCCAG
TACGAGATGG CGGTACGCGA GGCCAAGCGC GCCGCAGAAG AGGTAAAGGA CGCTGCCGAT
GACACGCCCA TGTACCTGAG TATCGGGACG GTCATGGTGC AGAAGAAGAA AGACTACATT
GACGGGAAGC TGACCGAGAA GGTAGAAACG CTCGAACTCC GGATCAAGTC CCTGGAAAAG
CAGGAGACCC TCCTGCAGGG CAAGTTCGAG CAGCTTCAGT CCCAGATCAA GGCCGCACTT
GAGGGGAAGG GCGCCCCGAA CGCGGCATAA
 
Protein sequence
MNLDTEDSIM QNISPKVQNQ FAMLQQVQQQ LQTVLSQKAQ YEMAVREAKR AAEEVKDAAD 
DTPMYLSIGT VMVQKKKDYI DGKLTEKVET LELRIKSLEK QETLLQGKFE QLQSQIKAAL
EGKGAPNAA