| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1809 |
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| Symbol | |
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| ID | 5411443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1888608 |
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| End bp | 1891214 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640869044 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001404968 |
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| Protein GI | 154151350 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.109167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTG CCCAAAATGC GAATGATATC CTCCGCGGGG AGGACAGGAA GAACGCCGCA
TACGTTATCC GTATTCTCCT TATTGTCTCC GGTGCGGGCA CTCTAATTTT GGGAATGGCC
GGGCTTTTTG GGCTGTTTTT CGGGATTGTC CCGCTTTCAA GCGTTTTTTC AGGCTACCGG
CCTATAGCAC TTTCTGCAGC ACTGATCTGG TGTTTTTTCG GTCTGGTCCT GATCTTCTGC
TGCAAACGGC CATTCTCCCG GATTGTAAAA GTTCTCCTCG GGACCGTGAC AGCATTCATC
GCGGTCGCTG TAGCGATCGA GTTTCCCCTG GGATTCCTTG GCCGGCATTC TTTTATCGAA
TCCTTCATCA ACACCAACGC ATCTCATTTT GTTCAGACCG CTCTTGTTCC CATCTCGCCG
CTGGCAGCGC TCATGATACT CCCTGCGGCA ATAGGCCTGT TTTTGCTGAT CGTAAAGAAG
GAGTACCCGG ATGAGAACAA AAATGAACAT TCACTCATTG GAATTTTCGG AGTATTCTGC
CTGCTCGCCG GCTTTCTCTT TATCGCAAGC TACCTGTACC AGATGCCGTT CTTCTATGGC
ACTTCAATCC TGCCCATAGC CTTCACGTCT GCACTGGCCG GCTTGTTTGT CGGTGTCGGG
ATGATTGCAG CGGCCGGCCC GGCCGTATTT CCGCTTGTAT ATTTTTCCGG CCCATCCACG
CGTGCACGTC TTCTCAGGTT CTTTGTCCCC TTCACGATTA CGCTCGTCCT TATCCAGAAC
CAGCTCTCGA TCCTCCTGCT CTCGATCTTC CATGTAAACC AGGCCATTGA GCTTTCCTTA
ACCCTCATTC TCTTCTGCGT CATTGCAAGC TGGGGAGTTA CGATCCTTGC GGGAAGTATA
GGTCATACCA TCGATCGCGA GCGGGAACTG AGAGCACAGG CAGAAGAAGA GCTCCGGCAG
AACTACGATG AGTTGAATAC CACATACGAG CTTCTGACGT CCACAGAGGA AGAACTGCGG
GGGAACTATG AGGAACTGGC AGGAAGCCAG AAAAAACTTC AGGAAAGCGA AGAGCGGCTC
CGCCTTTTTA TCAGGCATGC ACCGGCGGCG CTTGCGATGT TTGACCGGGA AATGCGTTAC
CTTGTTGTCA GCCAGAAGTG GATGACCGAT TACCAGTTAA AAGACCAGCA GCTCATCGGT
CGATCCCATT ACGAGATCTT CCCTGAAATT ACTGATGAGT GGAAAGCGGT TCACCGGCGT
GGTCTTGCAG GAGAAGTGGT GACTGCACAG GAGGACCGGT TTGTACGGGG GGATGGGACA
GTCCAGTGGC TCTCCTGGGA GGTCCGCCCG TGGTATACTT CGGATCATGC CATCGGCGGG
ATTGTTATTT TCTCTGAAGA TATCACCTGG CGTAAACAAG CAGAGATGGC ACTCGGTGAA
AGCCGGACAA AACTTGCCGC TGCGCTTGCC AGCATGACAG ATGCAGTCTT TATCTCGGAT
ACAGAGGGGA AGTTTATTGA GTTCAACGAT GCCTTTGCTA CGTTCCACCG GTTTAAGAAT
AAGGCCGAGT GCGCTACGAC CCTCGCAGAA TACCCGGCAT TTCTCGATGT GCTCATGGCC
GATGGGACGC CGGCGCCGCT GGATATGTGG GCAGTGCCAC GTGCCCTTCA GGGCGAGACC
GGGACAAACG TGGAATTTGC CCTCAAAAGA AAGGATACTG GAGAAACATG GGTGGGCAGT
TACAGTTATA GCCCCATCCG CGATGTAACC GGCAGGATCG TCGGTTCTGT GGTGACCGGC
CGGGATATCA CTGAAAAAAA GAAAGCAGAG CAGGAACTGC AGGAAAAACA TGCGGAACTG
AATGCAGCCT ATGAGCAGCT GACTTCGACT GAAGAAGAAC TCAGGCAAAA CTATGAGCAG
CTCGAGGCAA GTGAGAGGGC CCTTCGATCG AGCGAACAGC GCCTGCGGCG ATTCTACGAA
TCAGGCCTCT TTGGGGTGAT CTTCTGGACT ACCACCGGGA AGATCACTGA TGCCAATGAC
AAATTCCTTT CCATGACCGG GTACACCCGC GAAGATCTCC TTGCAGACCG GATCGACTGG
GGCGCCATGA CGCCGGACGA GTTCAGGGAG CAGGATGAAA AATCTCTGGA GGAACTCAGG
GAACGCGGCG TCAACAGGGC ACCCTTCGAG AAGGAGTACT TCCGTAAAGA CGGTACATGT
TTCCCGGTTC TCATTGCAGG AGCGATGCTT GACGATCACT TCCTTGAGGG CGTTGCTTTT
GTCCTGGATA TATCAGAACG CAAAACCGCG GAGGCAGCAC TGAAAAAGAG CGAGGAGCAG
TACCGCTCTC TGTTCGAAAA CATGCAGGAA GGGCTTGCCC ATTGCCGCAT GCTTTATGAT
AATGATGGCC AGCCGGTGGA CTTCGTATAC CTGGCTGTCA ACCATTCATT CGATCGGATT
ATTGGTGCCG GCACCGTGAT CGGAAAACCG GTCACCGAAG TGTTCCCGGG TATCCGCACT
GCATTCCCGC AATTGTTTGA GATTTACGGA CGGGTTGCCC GGACCGGGAA CCCTGAATCG
TTTGATATAG AATTCAGTCC CTCATAG
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| Protein sequence | MSSAQNANDI LRGEDRKNAA YVIRILLIVS GAGTLILGMA GLFGLFFGIV PLSSVFSGYR
PIALSAALIW CFFGLVLIFC CKRPFSRIVK VLLGTVTAFI AVAVAIEFPL GFLGRHSFIE
SFINTNASHF VQTALVPISP LAALMILPAA IGLFLLIVKK EYPDENKNEH SLIGIFGVFC
LLAGFLFIAS YLYQMPFFYG TSILPIAFTS ALAGLFVGVG MIAAAGPAVF PLVYFSGPST
RARLLRFFVP FTITLVLIQN QLSILLLSIF HVNQAIELSL TLILFCVIAS WGVTILAGSI
GHTIDREREL RAQAEEELRQ NYDELNTTYE LLTSTEEELR GNYEELAGSQ KKLQESEERL
RLFIRHAPAA LAMFDREMRY LVVSQKWMTD YQLKDQQLIG RSHYEIFPEI TDEWKAVHRR
GLAGEVVTAQ EDRFVRGDGT VQWLSWEVRP WYTSDHAIGG IVIFSEDITW RKQAEMALGE
SRTKLAAALA SMTDAVFISD TEGKFIEFND AFATFHRFKN KAECATTLAE YPAFLDVLMA
DGTPAPLDMW AVPRALQGET GTNVEFALKR KDTGETWVGS YSYSPIRDVT GRIVGSVVTG
RDITEKKKAE QELQEKHAEL NAAYEQLTST EEELRQNYEQ LEASERALRS SEQRLRRFYE
SGLFGVIFWT TTGKITDAND KFLSMTGYTR EDLLADRIDW GAMTPDEFRE QDEKSLEELR
ERGVNRAPFE KEYFRKDGTC FPVLIAGAML DDHFLEGVAF VLDISERKTA EAALKKSEEQ
YRSLFENMQE GLAHCRMLYD NDGQPVDFVY LAVNHSFDRI IGAGTVIGKP VTEVFPGIRT
AFPQLFEIYG RVARTGNPES FDIEFSPS
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