Gene Mboo_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1803 
Symbol 
ID5411982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1881324 
End bp1881965 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID640869038 
Producthypothetical protein 
Protein accessionYP_001404962 
Protein GI154151344 
COG category[S] Function unknown 
COG ID[COG1628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.3355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.104711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTCC AGAAAAAGGG CCTGCGGGTG CTCGGTATCG CTGATAGTTA TTCCGGGCGG 
GAGCACTCGA TCCTTGCCGG GATCGTGATG CGCCGGGATC TTGTCATTGA TGGAACGGCA
TTCTCCCAAG TCACCGTCGG CGGAATGGAT GCAACGGAGG GCGTTCTTAC CCTCATCCGG
GCACTTGATC GCCGGGATAT CAACGCGATC TTCCTTTCGG GCTGCGTGAT CGCTTTTTTC
AACATTATCG ATCCCCGGCG CGTACAGGAA TGCACGGGGC TGCCGGTCAT CTGCGTGTCC
TACGAGGAAT CCTTTGGTCT GGAAGGAGAC ATCCGTCATC ATTTTCCCGG GGATACCAAG
CGGCGGGACG CCTACCGGAG CCTTGGGGAA AGGATACCAC ATACACACCC AAACGGGCAG
ATGGTGTTCA TTCGCAGCTG GGGCATAGGT TTTTGCGAGG CCGCTCAGCT CTGTTCGGCT
TTTACCAGCG AAGGAAAGAT CCCCGAGCCC CTCCGCGTTG CACGGATATC AGCCCGGGCG
GTCCACGAAT TTACCCGGCG GGCGGATACA GGTACGGGAG GCGATGCAGC GGATTCCCTG
GCCTCGTCAG GAGAGTTCAT ATCTGGCAAG GATGATAAAT AG
 
Protein sequence
MHLQKKGLRV LGIADSYSGR EHSILAGIVM RRDLVIDGTA FSQVTVGGMD ATEGVLTLIR 
ALDRRDINAI FLSGCVIAFF NIIDPRRVQE CTGLPVICVS YEESFGLEGD IRHHFPGDTK
RRDAYRSLGE RIPHTHPNGQ MVFIRSWGIG FCEAAQLCSA FTSEGKIPEP LRVARISARA
VHEFTRRADT GTGGDAADSL ASSGEFISGK DDK