Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1803 |
Symbol | |
ID | 5411982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1881324 |
End bp | 1881965 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640869038 |
Product | hypothetical protein |
Protein accession | YP_001404962 |
Protein GI | 154151344 |
COG category | [S] Function unknown |
COG ID | [COG1628] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.3355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.104711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCTCC AGAAAAAGGG CCTGCGGGTG CTCGGTATCG CTGATAGTTA TTCCGGGCGG GAGCACTCGA TCCTTGCCGG GATCGTGATG CGCCGGGATC TTGTCATTGA TGGAACGGCA TTCTCCCAAG TCACCGTCGG CGGAATGGAT GCAACGGAGG GCGTTCTTAC CCTCATCCGG GCACTTGATC GCCGGGATAT CAACGCGATC TTCCTTTCGG GCTGCGTGAT CGCTTTTTTC AACATTATCG ATCCCCGGCG CGTACAGGAA TGCACGGGGC TGCCGGTCAT CTGCGTGTCC TACGAGGAAT CCTTTGGTCT GGAAGGAGAC ATCCGTCATC ATTTTCCCGG GGATACCAAG CGGCGGGACG CCTACCGGAG CCTTGGGGAA AGGATACCAC ATACACACCC AAACGGGCAG ATGGTGTTCA TTCGCAGCTG GGGCATAGGT TTTTGCGAGG CCGCTCAGCT CTGTTCGGCT TTTACCAGCG AAGGAAAGAT CCCCGAGCCC CTCCGCGTTG CACGGATATC AGCCCGGGCG GTCCACGAAT TTACCCGGCG GGCGGATACA GGTACGGGAG GCGATGCAGC GGATTCCCTG GCCTCGTCAG GAGAGTTCAT ATCTGGCAAG GATGATAAAT AG
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Protein sequence | MHLQKKGLRV LGIADSYSGR EHSILAGIVM RRDLVIDGTA FSQVTVGGMD ATEGVLTLIR ALDRRDINAI FLSGCVIAFF NIIDPRRVQE CTGLPVICVS YEESFGLEGD IRHHFPGDTK RRDAYRSLGE RIPHTHPNGQ MVFIRSWGIG FCEAAQLCSA FTSEGKIPEP LRVARISARA VHEFTRRADT GTGGDAADSL ASSGEFISGK DDK
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