Gene Mboo_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1801 
Symbol 
ID5411980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1879295 
End bp1879831 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content56% 
IMG OID640869036 
ProductL-fuculose phosphate aldolase 
Protein accessionYP_001404960 
Protein GI154151342 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.30516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.168684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATT ACGGCTTTGA ACGGATAGGA AAACGGCTGT TTGCAGAACA CCTTGTCGGC 
GGGAACTTCG GGAATATCAG TGTGCGGGAC GGGGAGAAAG GATTTTTTGT CAAACGAACC
GGGACCTATC TTGATGATCC CGGGGATCCG GCATTTGTTC CATTCCATGG GGAGGTCCCA
AAAGATGCCT CAAGCGAGTA CCGCGTTCAC CTCGCAGTGT ACAGAAAAAC TGCATACAAA
GCAATTGTCC ATGCCCATCC TCCCTATGCT GTTGCCGCCT CGCTTGAGGC AGACGAAATC
CGGCCGCTGG ACAGCGAAGG GATCATGTTC TGTCCACTCA TCCCGGTGAC CTCAGGCGAT
CCCGGGACGC AGGGTCTTGC TGACGCGGTG ACGGCCGCAA TGCTGCACCA TAAACTGGTC
ATTGCCCGGG GGCACGGGAC ATTTGCGGGT GGCGCAACTC TGGACGAGGC ATTCCAGCTC
ACTTCCCTTG CTGAACATGC CTGCCGGGTA ATCGCGTTCA GGAAGATGTT TCTCTGA
 
Protein sequence
MQDYGFERIG KRLFAEHLVG GNFGNISVRD GEKGFFVKRT GTYLDDPGDP AFVPFHGEVP 
KDASSEYRVH LAVYRKTAYK AIVHAHPPYA VAASLEADEI RPLDSEGIMF CPLIPVTSGD
PGTQGLADAV TAAMLHHKLV IARGHGTFAG GATLDEAFQL TSLAEHACRV IAFRKMFL