Gene Mboo_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1798 
Symbol 
ID5411977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1877774 
End bp1878046 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content51% 
IMG OID640869033 
Productthioredoxin domain-containing protein 
Protein accessionYP_001404957 
Protein GI154151339 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.317909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.703085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC CTGTTCTGTA TGACTTTTTT GCCACGTGGT GCGGCCCCTG CAAAATGCAG 
ACACCCATTA TCGAGGAACT GGCAAAGACA CTGGGCGACG CAGTGGAGAT AAAAAAAGTG
GATGTCGACG AGAACATGGA GCTTGCTGAG AAATATGGTA TCCGCGTGGT ACCCACCCTG
ATCATCGAAA AGGACGGGAA GATTGTCCAG ACACTGGAAG GCGTAACCGA TGCAGCAACG
CTTGAAAAAC TGCTCCGGCC GCTGGTGGGA TAA
 
Protein sequence
MTKPVLYDFF ATWCGPCKMQ TPIIEELAKT LGDAVEIKKV DVDENMELAE KYGIRVVPTL 
IIEKDGKIVQ TLEGVTDAAT LEKLLRPLVG