Gene Mboo_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1793 
Symbol 
ID5410109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1874131 
End bp1874538 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content56% 
IMG OID640869028 
Producthypothetical protein 
Protein accessionYP_001404952 
Protein GI154151334 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.694231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG AAGAGCTCTC TCATACGGCC GATGTGAAAA TCCGGGCCCG TGCGCCCACC 
CGGGAAGGGC TTTTTGAGGA AGCATTTCGG GCGCTGATGC AGGTGATGTA CGGGGAGGAC
CGGATCGGCA ATGTAACAAG GACTATCGAC CTCTGCGCGG ATGACCCACA ATCACTTCTC
TGTGATTTCC TGTCCGAGGT GCTCTATGTT TCCGAAGTGG ACGGGTTGGT TTTCCGGGAT
GCCCGCGTCC GGCTTGACGG GACGCGGCTC CATGCAGTTC TCGAAGGCGA ACCGTTCGAT
CGGGCGCGGC ACGCGATGGG TACTGAGGTA AAAGGGATCT CGTACTCGGG CATGTCGATT
GTTCAGGATG CCAAAGGATA TATGCTGGAC ATCTTATTTG ATGTATGA
 
Protein sequence
MSYEELSHTA DVKIRARAPT REGLFEEAFR ALMQVMYGED RIGNVTRTID LCADDPQSLL 
CDFLSEVLYV SEVDGLVFRD ARVRLDGTRL HAVLEGEPFD RARHAMGTEV KGISYSGMSI
VQDAKGYMLD ILFDV