| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1789 |
|---|
| Symbol | |
|---|
| ID | 5410105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1870670 |
|---|
| End bp | 1871650 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640869024 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_001404948 |
|---|
| Protein GI | 154151330 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCGATT CTGCGTTCAA GGTCATGGCG GTTCTCGAGA AGGCGGATGG GCCGGTCTCG
GGCGAAGTGA TCAGCAACGA ACTCGGGATC ACCCGTGCCG CTGTCTGGAA ACATATCAAC
GAACTGCGGA TGATGGGGTA CGATATCTCG TCGTCGCAGA AGGAAGGCTA CCGCTTGACA
AGGATGAGCA ACAAGCTGCT GCCTTACGAG ATCCACAAGA AACTCCACAC AAAGTTCATC
GGCAAGAAGA TGCGGTACCT GGAGAACACC CCCTCTACTA TCTGGGCGGG AAAGCAGCTC
TGTGCCGAGG GCGATGTGGA GAAGATGCAC GGCATGGTGA TCATCGCCGA GGAGCAGACC
GGCGGTGTCG GTCGTATGGG CCGGGCCTGG GTCTCGCCCA GTGGCGGGAT CTGGGTAACC
GTTGTGCTCA AACCCCATAT ACCGATCGAC CATGTCTTTA TGATAACCAT GGCCGGCTCG
GTGGCTGTGG CCCGGGCGAT ACGAAAAGAG TTCTCCCTGA GTGCATTGAT CAAATGGCCC
AATGACATCT TTATCGGGAA CAAGAAAGTT GCCGGGCTGC TCCTTGAGCT TGCGGCCGAG
TCCGATACCG TGCACTACTG CCTGCTTGGC ATGGGCATCG ATGCCAATAT CTCGCTTGCC
CAGTTTGCAC CCGGGCTAAG GGATCTCATC ACGTCGATCT CCGCAGAGCT CGGCCATGAA
GTGGACCGGG CTGCGTTTCT GGCACGGGTC TTAAAGGAAT TCGAGAGCCA GTATCTCCTT
GTCGAGAGCG GGGAGTACGA TACCATTATC CGGGAATGGA AGAGCCTCTC CTGCACGCTC
GAACACCGCG TGGATATACG AACCTTAAAG AACAGCTTTT CCGGTGAGGC GGTCGACATC
GATGAGTTTG GTGCGCTTAT CATCCGGAAA GACAACGGCA AGCTCGAACG GGTAATTGCC
GGAGACTGTT TCCACCAGTA A
|
|---|
| Protein sequence | MPDSAFKVMA VLEKADGPVS GEVISNELGI TRAAVWKHIN ELRMMGYDIS SSQKEGYRLT
RMSNKLLPYE IHKKLHTKFI GKKMRYLENT PSTIWAGKQL CAEGDVEKMH GMVIIAEEQT
GGVGRMGRAW VSPSGGIWVT VVLKPHIPID HVFMITMAGS VAVARAIRKE FSLSALIKWP
NDIFIGNKKV AGLLLELAAE SDTVHYCLLG MGIDANISLA QFAPGLRDLI TSISAELGHE
VDRAAFLARV LKEFESQYLL VESGEYDTII REWKSLSCTL EHRVDIRTLK NSFSGEAVDI
DEFGALIIRK DNGKLERVIA GDCFHQ
|
|---|
| |