Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1779 |
Symbol | |
ID | 5409839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1860152 |
End bp | 1860916 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640869013 |
Product | ABC-2 type transporter |
Protein accession | YP_001404938 |
Protein GI | 154151320 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.496998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.210099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGATA AGAACCTGAC CCGGAAGCGA AACCTGTTCA GTCAGGTTTT CGCGGGGATT CTTGTAAACT CCGTGTACGA GATGCAAAAC TACCCCATCG TACTCCTGAA TACGGTAGTC TCGCCTCTCT CAATATTAGT GGTGATTGTG TTCGTCAGCC ACGGCAGCCT TTTCGGAGTG GGCATCATGG GTGGATTCAT CATGGCCATG TTCTCCGCAG GCATGGCCCT TTCCGCCGAT CTTTCCCACT TAAAGAACGA TTTTAAGCTT CAGGATATGA TCGTGAGCTC CCCCACTGGC TGGCTCGCCT ATATGCTCGG GCTTTCCTTT GCTGAGATTG TGTACGCTAT CCCTGCCCTT ATAGTGCTCA CCGTTCTTGC CTCATTCGGG CTGTCCCTGA CCCTGGTGGG AGTCCTTGAA TTCGTGGCAG TACTGCTGCT TATTTTTATC ACTTCGATCT CCATTGGCTA TACGCTCGCT ACCTTCTCCA GCGACATCGT GCAGAGCTTT GCCTTTACAA GGCTGATCTC GACTTTTTTC TCCACCATCC CTCCCGTGTA TTATCCAATT ACCTACATCC CCCTTCCTTT CCGCTATCTG GCCTACCTCT CCCCTACTAC CTATGCGGCT GAGCTGGTCC AGGGGATTGG CGGGTACCTG TCCCTTTCTT TGACTACGGT CATAATCGAC TGGGCCGTTC TGATCTCTGT CACGGTTGCC TTGTTTGTTC TGGCCCGGAA CAAGGCGCGA TGGAGGGAGG TTTAG
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Protein sequence | MADKNLTRKR NLFSQVFAGI LVNSVYEMQN YPIVLLNTVV SPLSILVVIV FVSHGSLFGV GIMGGFIMAM FSAGMALSAD LSHLKNDFKL QDMIVSSPTG WLAYMLGLSF AEIVYAIPAL IVLTVLASFG LSLTLVGVLE FVAVLLLIFI TSISIGYTLA TFSSDIVQSF AFTRLISTFF STIPPVYYPI TYIPLPFRYL AYLSPTTYAA ELVQGIGGYL SLSLTTVIID WAVLISVTVA LFVLARNKAR WREV
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