Gene Mboo_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1779 
Symbol 
ID5409839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1860152 
End bp1860916 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content52% 
IMG OID640869013 
ProductABC-2 type transporter 
Protein accessionYP_001404938 
Protein GI154151320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.496998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.210099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGATA AGAACCTGAC CCGGAAGCGA AACCTGTTCA GTCAGGTTTT CGCGGGGATT 
CTTGTAAACT CCGTGTACGA GATGCAAAAC TACCCCATCG TACTCCTGAA TACGGTAGTC
TCGCCTCTCT CAATATTAGT GGTGATTGTG TTCGTCAGCC ACGGCAGCCT TTTCGGAGTG
GGCATCATGG GTGGATTCAT CATGGCCATG TTCTCCGCAG GCATGGCCCT TTCCGCCGAT
CTTTCCCACT TAAAGAACGA TTTTAAGCTT CAGGATATGA TCGTGAGCTC CCCCACTGGC
TGGCTCGCCT ATATGCTCGG GCTTTCCTTT GCTGAGATTG TGTACGCTAT CCCTGCCCTT
ATAGTGCTCA CCGTTCTTGC CTCATTCGGG CTGTCCCTGA CCCTGGTGGG AGTCCTTGAA
TTCGTGGCAG TACTGCTGCT TATTTTTATC ACTTCGATCT CCATTGGCTA TACGCTCGCT
ACCTTCTCCA GCGACATCGT GCAGAGCTTT GCCTTTACAA GGCTGATCTC GACTTTTTTC
TCCACCATCC CTCCCGTGTA TTATCCAATT ACCTACATCC CCCTTCCTTT CCGCTATCTG
GCCTACCTCT CCCCTACTAC CTATGCGGCT GAGCTGGTCC AGGGGATTGG CGGGTACCTG
TCCCTTTCTT TGACTACGGT CATAATCGAC TGGGCCGTTC TGATCTCTGT CACGGTTGCC
TTGTTTGTTC TGGCCCGGAA CAAGGCGCGA TGGAGGGAGG TTTAG
 
Protein sequence
MADKNLTRKR NLFSQVFAGI LVNSVYEMQN YPIVLLNTVV SPLSILVVIV FVSHGSLFGV 
GIMGGFIMAM FSAGMALSAD LSHLKNDFKL QDMIVSSPTG WLAYMLGLSF AEIVYAIPAL
IVLTVLASFG LSLTLVGVLE FVAVLLLIFI TSISIGYTLA TFSSDIVQSF AFTRLISTFF
STIPPVYYPI TYIPLPFRYL AYLSPTTYAA ELVQGIGGYL SLSLTTVIID WAVLISVTVA
LFVLARNKAR WREV