Gene Mboo_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1778 
Symbol 
ID5409838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1859210 
End bp1859659 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID640869012 
Producthypothetical protein 
Protein accessionYP_001404937 
Protein GI154151319 
COG category 
COG ID 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.38263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTTA CCAGAAAGAA TGAAGAAGCA GTGTCACCGG TCATAGGTGT CATCCTGATG 
GTCGCGATCA CTGTAATCCT CGCGGCTGTT ATTGCAGCGT TCGTATTTGG CATGGCCGGT
AACATCCAGA AGACCAAGGT GGTTGCGGCG ACTGAGCATC GTACCAATTC GAATAACGTG
ACTATCACCT ATCAGGGTGG ACAGGATGCA GGAACATTAG GCTCAATTTT CTTTACCGTT
GGCGGTGCAA ACGCAACAAT GACTGTTCCG AGCGGTGGTA CTTATAAAGC TGGTGGACAG
GGTACTGAAA CTCTTATGCC CACTTCAGGA AGTGTATTGC CCGTTGGAGC AACATGCATT
ATTACAAATG CGCCAACCAC TTCACATGTA GTTGGAGTGG GTCAGTTTAC GGACGGGTCA
ACACAAGTCA TTGTTGATAC CACCATCTAA
 
Protein sequence
MVFTRKNEEA VSPVIGVILM VAITVILAAV IAAFVFGMAG NIQKTKVVAA TEHRTNSNNV 
TITYQGGQDA GTLGSIFFTV GGANATMTVP SGGTYKAGGQ GTETLMPTSG SVLPVGATCI
ITNAPTTSHV VGVGQFTDGS TQVIVDTTI