| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1762 |
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| Symbol | |
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| ID | 5410827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1842679 |
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| End bp | 1843728 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640868996 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001404921 |
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| Protein GI | 154151303 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.319433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA AAAAAGCACT GATTACCGGG ATTACCGGAC AGGATGGATC CTACCTTGCG
GATTTTTTGC TGGATCGCGG GTACGAGGTT CACGGCATCA TACGGAGATC CTCCTCATTT
AATCGCCAAA GACTCGAACA TCTCTATATA GATCCACGGG AATCCGGGGC GAAACTTTTC
CTACATTATG GGGATCTATC TGATGCTGAA GCCCTTTCTC ATATTATATA CAATATCCGG
CCGGATGAAG TGTATAACCT GGGGGCCCAG AGCCATGTTC GGGTCAGCTT CGATATGCCT
GAATATACAA CAAACGTTAC CGCCTTGGGA GTAACACGAT TGTTGGAAAT TGTACGGAGA
TCCAACCACA ATGTCAGAAT ATATCAGGCC TCCTCCAGCG AAATGTTTGG TTCTGCTACC
CCGCCCCAGG GAGAAGAGAC TCCCTTTTGC CCGAGAAGCC CGTATGCCTG TTCAAAACTC
TATGCCTACT GGATGGTGAA AAATTACCGC GAGGGATATA AGTTGTTTGC CTCCAACGGG
ATCCTGTTTA ACCATGAATC CCCGCGGAGA GGGGAGACAT TTGTTACCCG TAAAATCACT
TACAGCATTG CTCGCCTGCT CACCAAAAAG GACCGACACC TGTATCTTGG CAATCTGGAA
TCGAAACGGG ACTGGGGGTA TGCACCAGAA TATGTTGAGG CAATGTGGAA GATGCTCCAG
CAGGAATCGG CAGATGATTT TGTTATCGGT ACCGGGGAGT CCCATTCTGT CCAGGAGTTC
CTCGACCAGG CATTTGCTTA CGCGGATCTT GATGTTGGCG AGTATGTAAA GATTGATCCG
TCATATTTCC GGCCAACAGA AGTTGAAGTT CTCATCGCGG ATACGAAAAA GTCTGAGAAG
AAACTTGGAT GGAAACCTAA GATCAAATTC AATGAACTGG TTAAGATCAT GATCGATGCA
GATATGCGGG CTGCCGGACT TGAACCCCTT GGGGACGGCG ATGAGATCCT GCAGAAAAAA
TTCCCTCATC GTTACTGGAC TTCTGACTAA
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| Protein sequence | MADKKALITG ITGQDGSYLA DFLLDRGYEV HGIIRRSSSF NRQRLEHLYI DPRESGAKLF
LHYGDLSDAE ALSHIIYNIR PDEVYNLGAQ SHVRVSFDMP EYTTNVTALG VTRLLEIVRR
SNHNVRIYQA SSSEMFGSAT PPQGEETPFC PRSPYACSKL YAYWMVKNYR EGYKLFASNG
ILFNHESPRR GETFVTRKIT YSIARLLTKK DRHLYLGNLE SKRDWGYAPE YVEAMWKMLQ
QESADDFVIG TGESHSVQEF LDQAFAYADL DVGEYVKIDP SYFRPTEVEV LIADTKKSEK
KLGWKPKIKF NELVKIMIDA DMRAAGLEPL GDGDEILQKK FPHRYWTSD
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