Gene Mboo_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1753 
Symbol 
ID5409914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1832698 
End bp1833591 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content48% 
IMG OID640868988 
Productglycosyl transferase family protein 
Protein accessionYP_001404913 
Protein GI154151295 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.625707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATGG AATCCCCACG CGTTTGCATT ATCCTCCTGA ATTGGAATGG CTGGCAGGAT 
ACGCTTGCGT GTATCAGTTC TCTACGCCGG ATCACCTATC CCAACTATCG CATCATTCTT
ATCGATAATG GCTCCAACGA TAACTCCTGT GACGTCTTTG CCTCGCATCT CGATGCCGGC
ATTTGTTTTA TCCCCCTCAA AGAGAATCTC GGGTTTGCGA AGGGATGCAA TTTTGGCATG
AAATACGCCT TGGAGAACAT GAATCCCGAT TATATCCTGC TGCTGAACAA TGACACGGTT
GTCGAACCGG ATTTCTTAAG CAAGGTTGTT CAGGAAGCCG AGGCATCCGG TGCCGGGATG
GCTCAGCCAT TGCTGTTGAG AATGGCAGAT CACAATATAA TCGATGTCAG CGGCCACAAA
CTCTACTGGG GACTCATGTT CGCCCGAGGT GCAGGGGAAC CAAACAAAGG GCAGTACAAA
GACAGCTCGG GGCTCATGGG AGTATCCGGT GCGTGTGCAC TGTATAAAAC TGAAATGATC
CGACAGATCG GAATATTGGA TGAATCCTAT TCCCATGGTT CCGAGGACAC CGAGTATGGG
TGGCGCGCAA CGAAAGCCGG GTGGAAAACT GCATTTATTC CATCAGCAAT TGTCTACCAT
AGAGGTCAGG TATCAGGAAA AAAAATGCTG AAAATTAATC CCCAATTGAT TAATGCCATA
TACAAAGATT CTGCCAGACC CTGCAAGACT CACGGAACTA GACTCCAGAA AATACAGTTT
GTTTTTTTAA TGCTGTACCA GGGAACCAGA AGCGTAATCG GGAAGTACCT GGGGCGGCAT
GAATTTGGAT GCGGACCCCA TATTATTGCG ATCAGAGAAA TGATTTTCGG TTGA
 
Protein sequence
MLMESPRVCI ILLNWNGWQD TLACISSLRR ITYPNYRIIL IDNGSNDNSC DVFASHLDAG 
ICFIPLKENL GFAKGCNFGM KYALENMNPD YILLLNNDTV VEPDFLSKVV QEAEASGAGM
AQPLLLRMAD HNIIDVSGHK LYWGLMFARG AGEPNKGQYK DSSGLMGVSG ACALYKTEMI
RQIGILDESY SHGSEDTEYG WRATKAGWKT AFIPSAIVYH RGQVSGKKML KINPQLINAI
YKDSARPCKT HGTRLQKIQF VFLMLYQGTR SVIGKYLGRH EFGCGPHIIA IREMIFG