| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1720 |
|---|
| Symbol | |
|---|
| ID | 5411731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1799241 |
|---|
| End bp | 1800041 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640868955 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_001404880 |
|---|
| Protein GI | 154151262 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3183] Predicted restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.26583 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATG TCTGGATTTT TCAATCGAAT CCTAAATACT ATGATCTCAT TCGTGATTTA
GGTGAACTGA CAAGGATGGA ATCTGGCTGG CCTATAAGAC AGCAGAAAAA TAAAATCGAG
AAAGGAGATT TGGCTTTATT GTGGGTATCT GGTGAGAATC GAGGAATTTA CGCGACTGCG
GATATTATTT CTAAACCTAA AATGGAAAAA GTTGACTTCA CAGATTCTTG GGTTAATCCT
AAAAGATCCG CAGATGGAAA AACTGAGGAA TTAATGGTCG AATTAGGACC TATGACGATT
TTAAAGCCGC CATTGCTTGA ATCGGAACTT AAACAAATTC GTGAATTGTT TTCACTCTCT
ATTATGCGAC AACATAATGG AACAAATTTC CCCGTTACAG AATCCGAATG GGATATACTT
TCCAAAGAGA TTGAAAAAAG AACTTTAACA AAATATGAGG AAATATTCAC TTGTCCGGAA
TATTTTACCG AAGGAAAAGA GAGAGAAATA ATCCAAACAA TTTATGAAAG AAATTCAAAA
CTAAGAGAGA TGGCCATAAA AATGCACGGA ACTACGTGTT CAGTGTGTGG TTTTAATTTC
GCTAAAAAAT ATGGGATATT AAGTGAGGGT TACATCGAAA TTCATCACCT TGTTCCTCAT
TCAGAGCATA AAATTAAAGG AGAATCTGAA ATCAATCCTG AAACAGACCT TATCCCACTT
TGCTCAAATT GTCATCGGAT AATACATAAA CCTGAAAAAA TGTTAAGCAT CGAAGAGTTG
AAAAAAATTG TAAAATCTTA A
|
|---|
| Protein sequence | MSNVWIFQSN PKYYDLIRDL GELTRMESGW PIRQQKNKIE KGDLALLWVS GENRGIYATA
DIISKPKMEK VDFTDSWVNP KRSADGKTEE LMVELGPMTI LKPPLLESEL KQIRELFSLS
IMRQHNGTNF PVTESEWDIL SKEIEKRTLT KYEEIFTCPE YFTEGKEREI IQTIYERNSK
LREMAIKMHG TTCSVCGFNF AKKYGILSEG YIEIHHLVPH SEHKIKGESE INPETDLIPL
CSNCHRIIHK PEKMLSIEEL KKIVKS
|
|---|
| |