Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1720 |
Symbol | |
ID | 5411731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1799241 |
End bp | 1800041 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640868955 |
Product | HNH endonuclease |
Protein accession | YP_001404880 |
Protein GI | 154151262 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.26583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATG TCTGGATTTT TCAATCGAAT CCTAAATACT ATGATCTCAT TCGTGATTTA GGTGAACTGA CAAGGATGGA ATCTGGCTGG CCTATAAGAC AGCAGAAAAA TAAAATCGAG AAAGGAGATT TGGCTTTATT GTGGGTATCT GGTGAGAATC GAGGAATTTA CGCGACTGCG GATATTATTT CTAAACCTAA AATGGAAAAA GTTGACTTCA CAGATTCTTG GGTTAATCCT AAAAGATCCG CAGATGGAAA AACTGAGGAA TTAATGGTCG AATTAGGACC TATGACGATT TTAAAGCCGC CATTGCTTGA ATCGGAACTT AAACAAATTC GTGAATTGTT TTCACTCTCT ATTATGCGAC AACATAATGG AACAAATTTC CCCGTTACAG AATCCGAATG GGATATACTT TCCAAAGAGA TTGAAAAAAG AACTTTAACA AAATATGAGG AAATATTCAC TTGTCCGGAA TATTTTACCG AAGGAAAAGA GAGAGAAATA ATCCAAACAA TTTATGAAAG AAATTCAAAA CTAAGAGAGA TGGCCATAAA AATGCACGGA ACTACGTGTT CAGTGTGTGG TTTTAATTTC GCTAAAAAAT ATGGGATATT AAGTGAGGGT TACATCGAAA TTCATCACCT TGTTCCTCAT TCAGAGCATA AAATTAAAGG AGAATCTGAA ATCAATCCTG AAACAGACCT TATCCCACTT TGCTCAAATT GTCATCGGAT AATACATAAA CCTGAAAAAA TGTTAAGCAT CGAAGAGTTG AAAAAAATTG TAAAATCTTA A
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Protein sequence | MSNVWIFQSN PKYYDLIRDL GELTRMESGW PIRQQKNKIE KGDLALLWVS GENRGIYATA DIISKPKMEK VDFTDSWVNP KRSADGKTEE LMVELGPMTI LKPPLLESEL KQIRELFSLS IMRQHNGTNF PVTESEWDIL SKEIEKRTLT KYEEIFTCPE YFTEGKEREI IQTIYERNSK LREMAIKMHG TTCSVCGFNF AKKYGILSEG YIEIHHLVPH SEHKIKGESE INPETDLIPL CSNCHRIIHK PEKMLSIEEL KKIVKS
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