Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1709 |
Symbol | |
ID | 5411302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1788604 |
End bp | 1790793 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640868944 |
Product | anaerobic ribonucleoside-triphosphate reductase |
Protein accession | YP_001404869 |
Protein GI | 154151251 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.37084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.962823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCCC GAAGGGAGAC CCGGCAACTG ACCTTTGGTG GCGGCTTTTC CCCGGCCCTG CCCCCGGTCC GCACAACCGA CGGCCACATC GTTGACTGGG ACCGGAACCG GATCGCCGAG CAGATCAAAA AGGAAACAAA ACTTGTCGAG TCTTTTTACG GGTACGAGGG CGCAGACGAC GCAACCGCAC AGGAGATCGC AAGGGAGGTC GAGCAGCGCA TCCTTGCGCT CGGCCTCAAG TCACTCTCGG GCCCGCTCAT CCGGGAGATC ATGAATATCA CGCTCCTCGA AAAAGGCATG GTGCAGTACC GTAACGTCTG CACCCGGGTG GGAACACCTG TCTACGATGC GCACCAGATC GATGTGGGCA AGGGCTTTGA GGCCCACGAC AACGCGAACC TCCAGGAGAA TGCCGAGACC AGCCACAAGA AAAAGGCGGA CAAGATCTCT AAAGAACAGT ACCTGCTCCA GCTCCCCCCG GAGCTTGCCG ACCATCACCT GTGCGGTGAG ATGCATATCC ACGATCTCGA ATACTTCGGC ACCCGGCCGT TCTGCCAGGA CTGGGACCTG AGGTATTTCT TTTATTATGG CCTCATGCCG GACGGGAACG GGACAAAGGC TTCTGTCGCC GGCCCGGCCA AACGTGCAGA GGTCGCAATC CTCCATGCGG TAAAAGCGCT CGGGAGCGCC CAGACCAATT TTGCCGGCGG GCAGGGTTAC TACAACTTCC TCACGTTCCT CGCGCCCTAC ATGGAGGGCA TGAGTTACGA CGAGATCAAG CAGAACATGC AGATGTTTGT GTACGAGATG ACCCAGATGA TGGTGGCCCG GGGCGGCCAG CTCGTCTTCT CATCCGTCCA GCTCTCACCG GGCGTCCCGA CGCTCTGGCA GGACAAGCCC TGCGTCTTTA AAGGAAAAAT CTGGGACGGG AAAGAGGCCC CGCGCCGCAC CTACGGAGAG TTTGAGCGGG AGGTCCGGCT GCTTTTCAAG GCGCTCATGG ACGTAATGAT CGAGGGCGAT TACTGGGGAA AGCCGTTCAA CTTCCCCAAA CCCGAGATCT CCATTGAGCC GGACTTCACA AAAGAGCGCG AGGAGTTCAA CCGGAACCAC CCGGATCTCC CGACATTCCG CGATCTTTAT CTCATGACAT TTGAGCTTGC CTCCAAGTTC GGGACGCCGT ACTACGACAA CCAGCTCCCG GCGTACCGCG GCGCAGGCAA GGGGATCTCA TGCTACCAGT GTTGCGCGTA CCAGTTCTCC ACAGTGGCAG ACAAGGACTC GGAGTTTGAC AAAAAACTCC TTTTCGAAGG TGGCCGGCAT TTCTCGATGG GCTCGTGGCA GGTGGTCTCG GTCAACTGCC CGCGTGCAGC CTATAATGCG GAGGGGAAGG ACGAACGGCT CTTTGCTGAA CTTCGGGCGC TCATGGATGT GGCCGTCGAA CTCTTCAAGA TAAAACGCCG GTGGATGAAT AATATCCGGG CGAGCGGGCG GATGCCGTTT GCCATGCAGC GGCCAAAGGA CCCCAACACC GGTGATCGCG GGGCAATTGC CGTTGATCTC GAAGGTCTTG TGTACACGAT CGGTGTCGTG GGGGTCAACG AAATGGTCCA GCACCACACA GGCCAGCAGG TCCACGAGTC AAAGGCGGCA TTCAAACTTG CCATCCGCGC CATGACCGAG ATGGAACTGT ATGCAAGGAA ACTCTCGGCA AAGAACAACA TGACCATAGC CCTTGCCCGC ACCCCGGCCG AGACAACCGG CCAGCGCTTT GCGGTCGCCG ATCTCATTGA TAAGCGGTAC CACGACATGG CGGCAAAGGT GATCAAGGGC GACCTCGATT ATGCACTCAA TAACCTGGGA AAGACCCGCG ACCTCCCGAT TTACTACACG AACGGGACAC ACGTGGCACC GGGCGCCAAT GTCCCGCTCA CAAAAAGGAT GGAGATCGAG CATGTCTTCT TCCCGATCGT GGACGGCGGA AACATCTTCC ACATATGGCT CGGGGAGGCC CGGCCCGATC CGCGTGGGCT CATGGATATG GCCATGAACC TCTGCCGGAA CACGCAGATC GGGTACTTCG CATTCACCCG GGATCTCACC GTGCCGCTCC GGCAGTTCCG TGAGTTCCGG CCGGAAAAGA GGGCGGAAGG ATCGTGGATG CCACCGGCAG ATGTGCCGGC AAAGGCATAA
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Protein sequence | MPARRETRQL TFGGGFSPAL PPVRTTDGHI VDWDRNRIAE QIKKETKLVE SFYGYEGADD ATAQEIAREV EQRILALGLK SLSGPLIREI MNITLLEKGM VQYRNVCTRV GTPVYDAHQI DVGKGFEAHD NANLQENAET SHKKKADKIS KEQYLLQLPP ELADHHLCGE MHIHDLEYFG TRPFCQDWDL RYFFYYGLMP DGNGTKASVA GPAKRAEVAI LHAVKALGSA QTNFAGGQGY YNFLTFLAPY MEGMSYDEIK QNMQMFVYEM TQMMVARGGQ LVFSSVQLSP GVPTLWQDKP CVFKGKIWDG KEAPRRTYGE FEREVRLLFK ALMDVMIEGD YWGKPFNFPK PEISIEPDFT KEREEFNRNH PDLPTFRDLY LMTFELASKF GTPYYDNQLP AYRGAGKGIS CYQCCAYQFS TVADKDSEFD KKLLFEGGRH FSMGSWQVVS VNCPRAAYNA EGKDERLFAE LRALMDVAVE LFKIKRRWMN NIRASGRMPF AMQRPKDPNT GDRGAIAVDL EGLVYTIGVV GVNEMVQHHT GQQVHESKAA FKLAIRAMTE MELYARKLSA KNNMTIALAR TPAETTGQRF AVADLIDKRY HDMAAKVIKG DLDYALNNLG KTRDLPIYYT NGTHVAPGAN VPLTKRMEIE HVFFPIVDGG NIFHIWLGEA RPDPRGLMDM AMNLCRNTQI GYFAFTRDLT VPLRQFREFR PEKRAEGSWM PPADVPAKA
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