| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1701 |
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| Symbol | |
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| ID | 5409901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1779098 |
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| End bp | 1781431 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868936 |
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| Product | HAE1 family efflux transporter |
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| Protein accession | YP_001404861 |
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| Protein GI | 154151243 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.271028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.950997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC AAATCTTTTC CGCCATTGCC CATGGGGTCA ATCGCCATCC CAAGGTGATA
ATCGCTGCAA TAGGGGTGCT TTTTGTCATT GCCCTCTATG GCATGACCAT GATCACCATG
GACACCAGCA ACAATGTGTA CATAGATAAA ACATCGCCGG AGGGCATCAC CAATAATCAC
TACACCGAAA CGATCAACAA AGACGTATTT GTCCTGATTA TCAAGACCAG CGACCCGACG
AGCCCCGCCG TGCTCAACTA CATGGACCGG CTGGAAGGGG ATCTCCGGCA GCAGCGCTAT
ATTTCCGGTG TTTCCAGTAT CGTTGATATC CTAAAACAGG AGAACCATGG GGTCCTCCCC
CAGACAAAGG GTGAGATCGA TGCGCTCGTA GGCCAGCTCC CGCCATCTGC CAGGGAAATT
TACCTGCCCT CTAATGTCCT GGTCTTAATG GAAGTGGATC CCTATACCGG GATCTCGGCA
AAACTCACCC AGACTACGGT CCTTGACACG GTCCAGCAGG TAGTTGACCA GTCGAATCCG
CCACCCGGAT TAGGAATTTC AATATCCGGA ATGCCGGCGT TCCATGCCCA GCTGGAGGCA
ACGATGGGAT CCCAGATGGG CGTGCTCATC GGTGCAGCAA TGATCCTGAT GGTAATCATG
ATGGGCCTGC TCTTTTCGTA CGTCAGCCAT CGGTTCCTGC CGGTCCTCTT TGTCGGGCTG
GGCCTTACCA CCGCGATGGG CATCATGGGG CTTGCCGGCA TTCAGCTTAC TCTTGCCGTG
CTCGGGGCTT TCCCGGTCAT GATCGGCCTT GGCATCGATT ATGCGATCCA GTTCCATGCC
CGGCTTGACG AAGAGGCCCG CAAAGGATCG CTTGAAGATG CAGTGTTCAT GACCATCACT
CGCACCGGGC CTGCCGTTAT GTATGCAATG CTTGCTACAT CCCTCGGGTT TGCTGCGATG
TTCGTCTCGA CCGTGCCCAT GATCCGTTCC TTTGGCCTTG TGGCGATGAT CGGTATCATG
AGCTGTTACT GCGTCTCGCT TGTGGGACTC CCGGCGATCG CTCTTGTCAT CCACTACAAG
CCTAAAGCCC AGACCCCTAA GGTATGTTAT GCGGTTGGCG AAGATGCCTG CGAGTCCCTG
CCACCTGCCA CTCCCAGGAA AAAATCCTGG TCCTACAGCC AGTTCCTTAC CGACAGCGCG
GTGAAGATCG CCAAAAATCC GATCCCTATC CTGCTCATCG GGTTAGTTAT TGCCGTCATC
GGCTTCCAGA TCGACCCGCT CATCCCTATC AATGCGGATC AGAAAGACTT TGTCCCCAGC
ACCCTGCCGG CAAAAATCGA CCTGGACACC GTCACAAACA TCCTTGGCTC TACGGTAACT
GCGGATTATT ATATCCAGGG TGCCCGGGTT ACCGATCTTG ATACGCTCCA ATGGATAAAA
AATTTCCAGG ATTACGAACT CTCCCACCAG TCCCACATTA CCTCGGCAAC CTCCATTGTG
ACCTACATTA TGGCCTACAA CGGCGGAACA ATGCCCCAGA CCCAGAGCGA AGCCGATGCA
GCACTGGAAA AAATCCCGGA GAGCATCAGG GATCAGTACC TCAGCGGGTC CACGCGTGGC
CTGATCGTGT TCACAACAAC AAATCTCCAG ATTCCCCAGC AGCAGGACTT GAAAAATCAG
CTCCAGAACG ATATAACGTT CCTTGATCCC CCGCCAGGAA TTACCCTGAG CCCGGTAGGG
GATTTCGAGG TCTTTACGAC AGTTATCTCT TCGCTTGTCG CATCCAAGGA CGAGATGACC
TACCTGGGAT TTGCCTTCAT CTTTGTGTAC CTCCTGCTGG TGTACCGGCA CATCCACGCA
ATCTCCCCCC TTATCCCGAT CATCTTCATT GTCGGCTGGA ATTCGGTGGT GATGTATGTG
CTTGGCATTG CCTACACACC GATGACTGCC ACCCTTGCCT CAATGACGAT CGGGGTTGCC
GCCGAATATA CCATCCTTGT GATGGAGCGC TATTCCGAAG AGGAGGAGAG ACTCGGCGAC
CATATCGCCG CCATCCAGGA GAGCGTCAGC AAGATTGGAT CTGCCATTAC GGTCTCCGGT
CTTGCGACAT TCTTTGGTTT CTCTGCGCTC TGTCTTTCCA GTTTCCCCAT TATCAGTAAC
TTCGGGATCT GTACCCTGAT CGCGGTCGGA TTCTCGCTCT TTGGCGCGAT CTTTGTGATG
CCGGCGGTAC TCTCCCTCAT GGGCGGGTTC ACCGAATGGC TTGAAAAGAG AAAACACCAG
TACCAGGCAG GACCGGAGAT TGCCACAAAA ACCGGAGAGC CCGGCCTGAA TTAA
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| Protein sequence | MIDQIFSAIA HGVNRHPKVI IAAIGVLFVI ALYGMTMITM DTSNNVYIDK TSPEGITNNH
YTETINKDVF VLIIKTSDPT SPAVLNYMDR LEGDLRQQRY ISGVSSIVDI LKQENHGVLP
QTKGEIDALV GQLPPSAREI YLPSNVLVLM EVDPYTGISA KLTQTTVLDT VQQVVDQSNP
PPGLGISISG MPAFHAQLEA TMGSQMGVLI GAAMILMVIM MGLLFSYVSH RFLPVLFVGL
GLTTAMGIMG LAGIQLTLAV LGAFPVMIGL GIDYAIQFHA RLDEEARKGS LEDAVFMTIT
RTGPAVMYAM LATSLGFAAM FVSTVPMIRS FGLVAMIGIM SCYCVSLVGL PAIALVIHYK
PKAQTPKVCY AVGEDACESL PPATPRKKSW SYSQFLTDSA VKIAKNPIPI LLIGLVIAVI
GFQIDPLIPI NADQKDFVPS TLPAKIDLDT VTNILGSTVT ADYYIQGARV TDLDTLQWIK
NFQDYELSHQ SHITSATSIV TYIMAYNGGT MPQTQSEADA ALEKIPESIR DQYLSGSTRG
LIVFTTTNLQ IPQQQDLKNQ LQNDITFLDP PPGITLSPVG DFEVFTTVIS SLVASKDEMT
YLGFAFIFVY LLLVYRHIHA ISPLIPIIFI VGWNSVVMYV LGIAYTPMTA TLASMTIGVA
AEYTILVMER YSEEEERLGD HIAAIQESVS KIGSAITVSG LATFFGFSAL CLSSFPIISN
FGICTLIAVG FSLFGAIFVM PAVLSLMGGF TEWLEKRKHQ YQAGPEIATK TGEPGLN
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