Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1696 |
Symbol | |
ID | 5409896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1774732 |
End bp | 1775394 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640868931 |
Product | hypothetical protein |
Protein accession | YP_001404856 |
Protein GI | 154151238 |
COG category | [S] Function unknown |
COG ID | [COG3548] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.393588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACCGG AAAAATCCCA TTCAACATAC CAGTTTTTCA AGAACCTCGA ACGCCTGATT AATCTCACGG ACTGTATATT CGCATTTGCA ATAACCCTGA TGGTCCTCTC GCTTACCGTT CCTGTTGTTA CAAAAGGTAA TATCGCCGCG GAACTCCCGG TACATCTCAT CAGTGAATGG CCGACGTTTT TGATCTATGC CATTAGTTTT GTCATTATCA GCGAATGGTG GATGGCCCAT CACCACATTT TCCAGCATAT AAGAAAACTG GACCGGACCG TTAGCGTACT GAACTTTTCA TTCCTTTTTT TTATTACCCT CATCCCGTTC CACACCTCGC TTATTATCGA GTATCCCGAG ACTCCGGTTG CTGTGATATT TTATGCGATG ACCCAGGCAT GTGCCGGTGT TGTTCTTGCT GCTCTCTGGT GGTATGCAAC AAAACATCGC AGACTTTCGG ACTCTGATAT CACTGACGGA TATGTGCATT ACCGGCTCAT ACGCCTGCTG GGCGGGTCAG GAGTATTTCT CATTTCGATA GGAATTGCAG TATTTAACAC CTATATTGCC GAATTATCGT GGATTTTTAT TGGGATCCTC ATATGGCTGG TAAACAAATG GTTTTACCGG AATGATCTGC TGGTTTCCGC TGAGGTCGAT TAA
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Protein sequence | MPPEKSHSTY QFFKNLERLI NLTDCIFAFA ITLMVLSLTV PVVTKGNIAA ELPVHLISEW PTFLIYAISF VIISEWWMAH HHIFQHIRKL DRTVSVLNFS FLFFITLIPF HTSLIIEYPE TPVAVIFYAM TQACAGVVLA ALWWYATKHR RLSDSDITDG YVHYRLIRLL GGSGVFLISI GIAVFNTYIA ELSWIFIGIL IWLVNKWFYR NDLLVSAEVD
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