Gene Mboo_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1696 
Symbol 
ID5409896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1774732 
End bp1775394 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content45% 
IMG OID640868931 
Producthypothetical protein 
Protein accessionYP_001404856 
Protein GI154151238 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.393588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCGG AAAAATCCCA TTCAACATAC CAGTTTTTCA AGAACCTCGA ACGCCTGATT 
AATCTCACGG ACTGTATATT CGCATTTGCA ATAACCCTGA TGGTCCTCTC GCTTACCGTT
CCTGTTGTTA CAAAAGGTAA TATCGCCGCG GAACTCCCGG TACATCTCAT CAGTGAATGG
CCGACGTTTT TGATCTATGC CATTAGTTTT GTCATTATCA GCGAATGGTG GATGGCCCAT
CACCACATTT TCCAGCATAT AAGAAAACTG GACCGGACCG TTAGCGTACT GAACTTTTCA
TTCCTTTTTT TTATTACCCT CATCCCGTTC CACACCTCGC TTATTATCGA GTATCCCGAG
ACTCCGGTTG CTGTGATATT TTATGCGATG ACCCAGGCAT GTGCCGGTGT TGTTCTTGCT
GCTCTCTGGT GGTATGCAAC AAAACATCGC AGACTTTCGG ACTCTGATAT CACTGACGGA
TATGTGCATT ACCGGCTCAT ACGCCTGCTG GGCGGGTCAG GAGTATTTCT CATTTCGATA
GGAATTGCAG TATTTAACAC CTATATTGCC GAATTATCGT GGATTTTTAT TGGGATCCTC
ATATGGCTGG TAAACAAATG GTTTTACCGG AATGATCTGC TGGTTTCCGC TGAGGTCGAT
TAA
 
Protein sequence
MPPEKSHSTY QFFKNLERLI NLTDCIFAFA ITLMVLSLTV PVVTKGNIAA ELPVHLISEW 
PTFLIYAISF VIISEWWMAH HHIFQHIRKL DRTVSVLNFS FLFFITLIPF HTSLIIEYPE
TPVAVIFYAM TQACAGVVLA ALWWYATKHR RLSDSDITDG YVHYRLIRLL GGSGVFLISI
GIAVFNTYIA ELSWIFIGIL IWLVNKWFYR NDLLVSAEVD