Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1683 |
Symbol | |
ID | 5410630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1760819 |
End bp | 1761559 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640868918 |
Product | hypothetical protein |
Protein accession | YP_001404843 |
Protein GI | 154151225 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC CGGCACGGTA CCCGGAGATT GATCTCCTCC GGGGGATCGC TCTCCTGATG ATGATCCTCT TCCACACGCT CTTTGATCTT GCATTCTTCC GGATCGCACC GGTCGATGTT TCTGACGGTT TCTGGCGGTA CTTTGCCTAT GCCACCGCTT CGCTCTTCCT CCTGATAGTA GGGGTGTCGC TTTCTGTCAG CCATGCCCGG GCCGCACGCC GGCTCCAGGG CCGTGCACTT GTGCAGAAAT TCCTCCTCCG TGGAGGCGGG ATCTTCTGCT GTGGACTTCT GGTAACCGTT GCCACCTGGT GGTACCTGCA GGAAGGCTAC GTGATCTTTG GTATCCTCCA CCTGATCGGG CTTGCCGTCA TGCTCTCGCC GCTCTTCTTC CGGTTCCGCA CGTGGAACGC GGTGATAGGG ATCGTTTTTA TCGCTATCGG GTGGATTCTT GCCACCATCC CCGGGCCGAT GGAGCTTTTG GTTATCGGCA TCCACCCGCT CACCTTCCAG AGCGTTGATT ACACACCCGT CTTCCCATGG ATGGGCCTGG TACTGATCGG TCTGGCCATC GGGGAGTTTG CCTACCCCGG GGGAGAACGG TGGTGGACGC TCCCAAAACT TCCCGAACGG GCGATCGCCC CGGTCACGTT TATCGGCAGG CACACCCTTG TCATCTATCT GGTTCACCAG CCGGTGATCC TGCTCATCCT GTACCTGGTA AACGGGGCAC CGGTGCTTTA A
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Protein sequence | MSGPARYPEI DLLRGIALLM MILFHTLFDL AFFRIAPVDV SDGFWRYFAY ATASLFLLIV GVSLSVSHAR AARRLQGRAL VQKFLLRGGG IFCCGLLVTV ATWWYLQEGY VIFGILHLIG LAVMLSPLFF RFRTWNAVIG IVFIAIGWIL ATIPGPMELL VIGIHPLTFQ SVDYTPVFPW MGLVLIGLAI GEFAYPGGER WWTLPKLPER AIAPVTFIGR HTLVIYLVHQ PVILLILYLV NGAPVL
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