Gene Mboo_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1683 
Symbol 
ID5410630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1760819 
End bp1761559 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID640868918 
Producthypothetical protein 
Protein accessionYP_001404843 
Protein GI154151225 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC CGGCACGGTA CCCGGAGATT GATCTCCTCC GGGGGATCGC TCTCCTGATG 
ATGATCCTCT TCCACACGCT CTTTGATCTT GCATTCTTCC GGATCGCACC GGTCGATGTT
TCTGACGGTT TCTGGCGGTA CTTTGCCTAT GCCACCGCTT CGCTCTTCCT CCTGATAGTA
GGGGTGTCGC TTTCTGTCAG CCATGCCCGG GCCGCACGCC GGCTCCAGGG CCGTGCACTT
GTGCAGAAAT TCCTCCTCCG TGGAGGCGGG ATCTTCTGCT GTGGACTTCT GGTAACCGTT
GCCACCTGGT GGTACCTGCA GGAAGGCTAC GTGATCTTTG GTATCCTCCA CCTGATCGGG
CTTGCCGTCA TGCTCTCGCC GCTCTTCTTC CGGTTCCGCA CGTGGAACGC GGTGATAGGG
ATCGTTTTTA TCGCTATCGG GTGGATTCTT GCCACCATCC CCGGGCCGAT GGAGCTTTTG
GTTATCGGCA TCCACCCGCT CACCTTCCAG AGCGTTGATT ACACACCCGT CTTCCCATGG
ATGGGCCTGG TACTGATCGG TCTGGCCATC GGGGAGTTTG CCTACCCCGG GGGAGAACGG
TGGTGGACGC TCCCAAAACT TCCCGAACGG GCGATCGCCC CGGTCACGTT TATCGGCAGG
CACACCCTTG TCATCTATCT GGTTCACCAG CCGGTGATCC TGCTCATCCT GTACCTGGTA
AACGGGGCAC CGGTGCTTTA A
 
Protein sequence
MSGPARYPEI DLLRGIALLM MILFHTLFDL AFFRIAPVDV SDGFWRYFAY ATASLFLLIV 
GVSLSVSHAR AARRLQGRAL VQKFLLRGGG IFCCGLLVTV ATWWYLQEGY VIFGILHLIG
LAVMLSPLFF RFRTWNAVIG IVFIAIGWIL ATIPGPMELL VIGIHPLTFQ SVDYTPVFPW
MGLVLIGLAI GEFAYPGGER WWTLPKLPER AIAPVTFIGR HTLVIYLVHQ PVILLILYLV
NGAPVL