Gene Mboo_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1677 
Symbol 
ID5412000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1751121 
End bp1751894 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID640868911 
Producthypothetical protein 
Protein accessionYP_001404837 
Protein GI154151219 
COG category[S] Function unknown 
COG ID[COG3390] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGTG CAGCCCGGGT TTTTGCCGGA GATTATGCGC AGGCAACGCT GTCAGTACCT 
GCGGATGAAC CCGGGAATGC GGCATGGGTG GTCACCCCGG GCGGTGCCTG GTGCCGGTCG
CTCTATCTCT GCGGTGCGCT CACCGAGATC ACAGAGGTGG CAGATGTCCT GTACTGCCGG
CTTGCCGATC CGACCGGGGC TTTTGACCTT GTCGCAGGAG GCAGGCGCGG GGTTGTGGCG
GGACAGATCC GTGCGATCCC GGTACCGTCC TTTGTTGCGG TAACAGGGAC CGCACAGCTG
TACCGGAAGG GCGGAGGGTG TGTAGTCCAG GTCCGGCCGG AATTCGTGGA GACGATCGAT
AAAGCCGGAC GGAACCGGTG GGTTATTGCA ACCGCAGACA TGGCAATCGC CCGTCTCGAA
GGGCTGCTAT CCGCCATTGA AGGAACCACC GGGGACGACC GGGCAGCCCG GGTTGTCCGG
CACTACAGCC TCACCCGGGA GAATCTCCGG GACATGGCCG CACAGATCGA AGTGGCGCTC
GCCGGTGCCT GCACCGTTCC CGATGCGCCA CCGGCCACGG AAGAAGATAT CAGTGCAGCA
GTGATGGAGA TCATCCGCAC GGAAAGCGGC CCCCGGGGCG TTTCCGTAGA AGATGTGCTC
ACAAAGGCCG GCGTGCTCGG GCATACTCAA AGGGCGGTGC TTGCCGCGAT CGAGACACTC
ATCACGAACG ATGACTGCTA CCAGCCCCAG AAAGGATACA TCAGGCCACT ATGA
 
Protein sequence
MEGAARVFAG DYAQATLSVP ADEPGNAAWV VTPGGAWCRS LYLCGALTEI TEVADVLYCR 
LADPTGAFDL VAGGRRGVVA GQIRAIPVPS FVAVTGTAQL YRKGGGCVVQ VRPEFVETID
KAGRNRWVIA TADMAIARLE GLLSAIEGTT GDDRAARVVR HYSLTRENLR DMAAQIEVAL
AGACTVPDAP PATEEDISAA VMEIIRTESG PRGVSVEDVL TKAGVLGHTQ RAVLAAIETL
ITNDDCYQPQ KGYIRPL